RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 PSMB6P28072 239 aa20.23■□□□□ 0.83
CDKN2A-201ENST00000304494 C15orf32Q32M92 178 aa20.23■□□□□ 0.83
CDKN2A-201ENST00000304494 COMMD5Q9GZQ3 224 aa20.23■□□□□ 0.83
CDKN2A-201ENST00000304494 COL7A1Q02388 2944 aa20.23■□□□□ 0.83
CDKN2A-201ENST00000304494 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.22■□□□□ 0.83
CDKN2A-201ENST00000304494 A0A1B0GW64 132 aa20.22■□□□□ 0.83
CDKN2A-201ENST00000304494 TPPPO94811 219 aa20.22■□□□□ 0.83
CDKN2A-201ENST00000304494 AREGP15514 252 aa20.22■□□□□ 0.83
CDKN2A-201ENST00000304494 C15orf40Q8WUR7 153 aa20.22■□□□□ 0.83
CDKN2A-201ENST00000304494 DGCR14Q96DF8 476 aaKnown RBP20.22■□□□□ 0.83
CDKN2A-201ENST00000304494 EXTL2Q9UBQ6 330 aa20.22■□□□□ 0.83
CDKN2A-201ENST00000304494 FBXL7Q9UJT9 491 aa20.22■□□□□ 0.83
CDKN2A-201ENST00000304494 IGLV1-51P01701 117 aa20.21■□□□□ 0.83
CDKN2A-201ENST00000304494 HIST1H1BP16401 226 aaKnown RBP20.21■□□□□ 0.83
CDKN2A-201ENST00000304494 CTRB1P17538 263 aa20.21■□□□□ 0.83
CDKN2A-201ENST00000304494 OR2B8PP59922 312 aa20.21■□□□□ 0.83
CDKN2A-201ENST00000304494 CTRB2Q6GPI1 263 aa20.21■□□□□ 0.83
CDKN2A-201ENST00000304494 C11orf87Q6NUJ2 197 aa20.21■□□□□ 0.83
CDKN2A-201ENST00000304494 SRSF8Q9BRL6 282 aaKnown RBP20.21■□□□□ 0.83
CDKN2A-201ENST00000304494 MARCH11A6NNE9 402 aa20.2■□□□□ 0.82
CDKN2A-201ENST00000304494 DEFA4P12838 97 aa20.2■□□□□ 0.82
CDKN2A-201ENST00000304494 MYOD1P15172 320 aa20.2■□□□□ 0.82
CDKN2A-201ENST00000304494 PEMTQ9UBM1 199 aa20.2■□□□□ 0.82
CDKN2A-201ENST00000304494 TRAV3A0A0B4J244 114 aa20.19■□□□□ 0.82
CDKN2A-201ENST00000304494 CGB1A6NKQ9 187 aa20.19■□□□□ 0.82
CDKN2A-201ENST00000304494 BMPR1BO00238 502 aa20.19■□□□□ 0.82
CDKN2A-201ENST00000304494 KLK9Q2XQG4 91 aa20.19■□□□□ 0.82
CDKN2A-201ENST00000304494 THOC7Q6I9Y2 204 aaKnown RBP20.19■□□□□ 0.82
CDKN2A-201ENST00000304494 IL34Q6ZMJ4 242 aa20.19■□□□□ 0.82
CDKN2A-201ENST00000304494 SLC38A6Q8IZM9 456 aa20.19■□□□□ 0.82
CDKN2A-201ENST00000304494 FCAMRQ8WWV6 532 aa20.19■□□□□ 0.82
CDKN2A-201ENST00000304494 FANCD2OSQ96PS1 177 aa20.19■□□□□ 0.82
CDKN2A-201ENST00000304494 SIGLEC8Q9NYZ4 499 aa20.19■□□□□ 0.82
CDKN2A-201ENST00000304494 KLK9Q9UKQ9 250 aa20.19■□□□□ 0.82
CDKN2A-201ENST00000304494 LPAR6P43657 344 aa20.18■□□□□ 0.82
CDKN2A-201ENST00000304494 UCP3P55916 312 aa20.18■□□□□ 0.82
CDKN2A-201ENST00000304494 PHLDA2Q53GA4 152 aa20.18■□□□□ 0.82
CDKN2A-201ENST00000304494 C19orf35Q6ZS72 473 aa20.18■□□□□ 0.82
CDKN2A-201ENST00000304494 HAPLN4Q86UW8 402 aa20.18■□□□□ 0.82
CDKN2A-201ENST00000304494 CADM3Q8N126 398 aa20.18■□□□□ 0.82
CDKN2A-201ENST00000304494 QTRT1Q9BXR0 403 aaKnown RBP20.18■□□□□ 0.82
CDKN2A-201ENST00000304494 FAM212BQ9NTI7 297 aaPredicted RBP20.18■□□□□ 0.82
CDKN2A-201ENST00000304494 KLK11Q9UBX7 282 aa20.18■□□□□ 0.82
CDKN2A-201ENST00000304494 H0Y980 276 aa20.17■□□□□ 0.82
CDKN2A-201ENST00000304494 IFNA6P05013 189 aa20.17■□□□□ 0.82
CDKN2A-201ENST00000304494 REG1AP05451 166 aa20.17■□□□□ 0.82
CDKN2A-201ENST00000304494 RPA2P15927 270 aa20.17■□□□□ 0.82
CDKN2A-201ENST00000304494 RNASE12Q5GAN4 147 aaKnown RBP20.17■□□□□ 0.82
CDKN2A-201ENST00000304494 RAB2BQ8WUD1 216 aa20.17■□□□□ 0.82
CDKN2A-201ENST00000304494 M0QYG6 137 aa20.16■□□□□ 0.82
CDKN2A-201ENST00000304494 RGS5O15539 181 aa20.16■□□□□ 0.82
CDKN2A-201ENST00000304494 NDUFB8O95169 186 aa20.16■□□□□ 0.82
CDKN2A-201ENST00000304494 KRASP01116 189 aa20.16■□□□□ 0.82
CDKN2A-201ENST00000304494 TBPP20226 339 aa20.16■□□□□ 0.82
CDKN2A-201ENST00000304494 SPCS2Q15005 226 aa20.16■□□□□ 0.82
CDKN2A-201ENST00000304494 ZNF585BQ52M93 769 aa20.16■□□□□ 0.82
CDKN2A-201ENST00000304494 RNASE10Q5GAN6 216 aaKnown RBP20.16■□□□□ 0.82
CDKN2A-201ENST00000304494 HSD17B13Q7Z5P4 300 aaPredicted RBP20.16■□□□□ 0.82
CDKN2A-201ENST00000304494 CLVS1Q8IUQ0 354 aaPredicted RBP20.16■□□□□ 0.82
CDKN2A-201ENST00000304494 OR52I2Q8NH67 350 aa20.16■□□□□ 0.82
CDKN2A-201ENST00000304494 EEF1AKMT3Q96AZ1 226 aa20.16■□□□□ 0.82
CDKN2A-201ENST00000304494 IGLC7A0M8Q6 106 aa20.15■□□□□ 0.82
CDKN2A-201ENST00000304494 CYB5BO43169 146 aa20.15■□□□□ 0.82
CDKN2A-201ENST00000304494 GGCTO75223 188 aaKnown RBP20.15■□□□□ 0.82
CDKN2A-201ENST00000304494 SNAPC5O75971 98 aa20.15■□□□□ 0.82
CDKN2A-201ENST00000304494 CSN3P07498 182 aa20.15■□□□□ 0.82
CDKN2A-201ENST00000304494 TBC1D26Q86UD7 250 aa20.15■□□□□ 0.82
CDKN2A-201ENST00000304494 CXorf58Q96LI9 332 aa20.15■□□□□ 0.82
CDKN2A-201ENST00000304494 BCL7BQ9BQE9 202 aa20.15■□□□□ 0.82
CDKN2A-201ENST00000304494 THYN1Q9P016 225 aa20.15■□□□□ 0.82
CDKN2A-201ENST00000304494 MTFP1Q9UDX5 166 aa20.15■□□□□ 0.82
CDKN2A-201ENST00000304494 IGLV11-55A0A075B6I3 123 aa20.14■□□□□ 0.81
CDKN2A-201ENST00000304494 TRAPPC2P0DI81 140 aa20.14■□□□□ 0.81
CDKN2A-201ENST00000304494 TRAPPC2BP0DI82 140 aa20.14■□□□□ 0.81
CDKN2A-201ENST00000304494 G6PCP35575 357 aa20.14■□□□□ 0.81
CDKN2A-201ENST00000304494 TMBIM6P55061 237 aa20.14■□□□□ 0.81
CDKN2A-201ENST00000304494 ARRDC1Q8N5I2 433 aa20.14■□□□□ 0.81
CDKN2A-201ENST00000304494 OR1L8Q8NGR8 309 aa20.14■□□□□ 0.81
CDKN2A-201ENST00000304494 ABHD1Q96SE0 405 aa20.14■□□□□ 0.81
CDKN2A-201ENST00000304494 SORL1Q92673 2214 aa20.14■□□□□ 0.81
CDKN2A-201ENST00000304494 TRBV7-1A0A0A6YYK4 115 aa20.13■□□□□ 0.81
CDKN2A-201ENST00000304494 TEX50A0A1B0GTY4 177 aa20.13■□□□□ 0.81
CDKN2A-201ENST00000304494 PPP5D1E7EU14 171 aa20.13■□□□□ 0.81
CDKN2A-201ENST00000304494 CD3DP04234 171 aa20.13■□□□□ 0.81
CDKN2A-201ENST00000304494 LCN12Q6JVE5 192 aa20.13■□□□□ 0.81
CDKN2A-201ENST00000304494 TSC22D3Q99576 134 aa20.13■□□□□ 0.81
CDKN2A-201ENST00000304494 MIXL1Q9H2W2 232 aa20.13■□□□□ 0.81
CDKN2A-201ENST00000304494 DMRT1Q9Y5R6 373 aa20.13■□□□□ 0.81
CDKN2A-201ENST00000304494 IGHV3-23P01764 117 aa20.12■□□□□ 0.81
CDKN2A-201ENST00000304494 ARL3P36405 182 aa20.12■□□□□ 0.81
CDKN2A-201ENST00000304494 MRPS10P82664 201 aaKnown RBP20.12■□□□□ 0.81
CDKN2A-201ENST00000304494 LAX1Q8IWV1 398 aa20.12■□□□□ 0.81
CDKN2A-201ENST00000304494 Q8N402 240 aa20.12■□□□□ 0.81
CDKN2A-201ENST00000304494 ZNF486Q96H40 463 aaPredicted RBP20.12■□□□□ 0.81
CDKN2A-201ENST00000304494 CCDC140Q96MF4 163 aa20.12■□□□□ 0.81
CDKN2A-201ENST00000304494 ASCL2Q99929 193 aa20.12■□□□□ 0.81
CDKN2A-201ENST00000304494 FKBP11Q9NYL4 201 aa20.12■□□□□ 0.81
CDKN2A-201ENST00000304494 PRNDQ9UKY0 176 aa20.12■□□□□ 0.81
CDKN2A-201ENST00000304494 OR51B2Q9Y5P1 312 aa20.12■□□□□ 0.81
CDKN2A-201ENST00000304494 NOL3O60936 208 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms