RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 HRASP01112 189 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 C1QTNF9P0C862 333 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 GFRA1P56159 465 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 KLF3P57682 345 aaPredicted RBP11.79□□□□□ -0.52
SDC2-201ENST00000302190 TNFAIP6P98066 277 aaPredicted RBP11.79□□□□□ -0.52
SDC2-201ENST00000302190 ATP6V1FQ16864 119 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 TBX15Q96SF7 602 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 DERL1Q9BUN8 251 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 ZNF71Q9NQZ8 489 aaPredicted RBP11.79□□□□□ -0.52
SDC2-201ENST00000302190 FAM157AC9JC47 383 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 APOA2P02652 100 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 CNN1P51911 297 aaKnown RBP11.79□□□□□ -0.52
SDC2-201ENST00000302190 PTTG1IPP53801 180 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 AARDQ4LEZ3 155 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 ASCL5Q7RTU5 278 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 ITLN1Q8WWA0 313 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 ZNF835Q9Y2P0 537 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 CD82P27701 267 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 VPS25Q9BRG1 176 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 NPCDR1Q9BY65 106 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 MANBALQ9NQG1 85 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 ANAPC10Q9UM13 185 aa11.79□□□□□ -0.52
SDC2-201ENST00000302190 C20orf202A1L168 122 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 RRHO14718 337 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 IL18BPO95998 194 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 UBE2G1P62253 170 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 RHOBP62745 196 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 RPL23P62829 140 aaKnown RBP11.78□□□□□ -0.52
SDC2-201ENST00000302190 RTL8BQ17RB0 113 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 GMPPAQ96IJ6 420 aaPredicted RBP11.78□□□□□ -0.52
SDC2-201ENST00000302190 PKIBQ9C010 78 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 SLC35D1Q9NTN3 355 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 MALRD1Q5VYJ5 2156 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 C21orf140B9A014 251 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 ETV2O00321 342 aaPredicted RBP11.78□□□□□ -0.52
SDC2-201ENST00000302190 ZNF253O75346 499 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 AMBPP02760 352 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 IGHV1-2P23083 117 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 S100A7P31151 101 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 SAXO1Q8IYX7 474 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 OR5B3Q8NH48 314 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 DNAJC4Q9NNZ3 241 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 KLK10O43240 276 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 OR8I2Q8N0Y5 310 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 C11orf42Q8N5U0 333 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 SRD5A3Q9H8P0 318 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 ADAMTS20P59510 1910 aa11.78□□□□□ -0.52
SDC2-201ENST00000302190 J3QR06 171 aa11.77□□□□□ -0.52
SDC2-201ENST00000302190 COX7A2P2O60397 106 aa11.77□□□□□ -0.52
SDC2-201ENST00000302190 CRYABP02511 175 aaKnown RBP11.77□□□□□ -0.52
SDC2-201ENST00000302190 CECR9P0C854 216 aa11.77□□□□□ -0.52
SDC2-201ENST00000302190 GZMHP20718 246 aa11.77□□□□□ -0.52
SDC2-201ENST00000302190 ACP1P24666 158 aa11.77□□□□□ -0.52
SDC2-201ENST00000302190 TRAT1Q6PIZ9 186 aa11.77□□□□□ -0.52
SDC2-201ENST00000302190 PCSK4Q6UW60 755 aa11.77□□□□□ -0.52
SDC2-201ENST00000302190 CISD2Q8N5K1 135 aaKnown RBP11.77□□□□□ -0.52
SDC2-201ENST00000302190 OR8G5Q8NG78 346 aa11.77□□□□□ -0.52
SDC2-201ENST00000302190 LSM10Q969L4 123 aaKnown RBP11.77□□□□□ -0.52
SDC2-201ENST00000302190 TMEM140Q9NV12 185 aa11.77□□□□□ -0.52
SDC2-201ENST00000302190 PLXNB1O43157 2135 aa11.77□□□□□ -0.52
SDC2-201ENST00000302190 A0A1B0GUS0 222 aa11.77□□□□□ -0.53
SDC2-201ENST00000302190 HES1Q14469 280 aa11.77□□□□□ -0.53
SDC2-201ENST00000302190 DOLPP1Q86YN1 238 aa11.77□□□□□ -0.53
SDC2-201ENST00000302190 OR4S2Q8NH73 311 aa11.77□□□□□ -0.53
SDC2-201ENST00000302190 BCL2L2Q92843 193 aaPredicted RBP11.77□□□□□ -0.53
SDC2-201ENST00000302190 HSPB9Q9BQS6 159 aa11.77□□□□□ -0.53
SDC2-201ENST00000302190 VAMP8Q9BV40 100 aa11.77□□□□□ -0.53
SDC2-201ENST00000302190 ZNF586Q9NXT0 402 aa11.77□□□□□ -0.53
SDC2-201ENST00000302190 HSBP1O75506 76 aa11.77□□□□□ -0.53
SDC2-201ENST00000302190 OR4A8P0C604 315 aa11.77□□□□□ -0.53
SDC2-201ENST00000302190 PAX9P55771 341 aa11.77□□□□□ -0.53
SDC2-201ENST00000302190 UBE2L3P68036 154 aaKnown RBP11.77□□□□□ -0.53
SDC2-201ENST00000302190 SH2D2AQ9NP31 389 aa11.77□□□□□ -0.53
SDC2-201ENST00000302190 KCNIP2Q9NS61 270 aa11.77□□□□□ -0.53
SDC2-201ENST00000302190 CNIH1O95406 144 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 CRYBB3P26998 211 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 ERHP84090 104 aaKnown RBP11.76□□□□□ -0.53
SDC2-201ENST00000302190 OR1L6Q8NGR2 347 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 DIRC2Q96SL1 478 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 RAB9BQ9NP90 201 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 CACNA1AO00555 2505 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 SCO2A0A1W2PP80 73 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 CCKARP32238 428 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 INO80CQ6PI98 192 aaPredicted RBP11.76□□□□□ -0.53
SDC2-201ENST00000302190 TEPPQ6URK8 271 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 LINC00596Q86U02 117 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 SSBP3Q9BWW4 388 aaPredicted RBP11.76□□□□□ -0.53
SDC2-201ENST00000302190 FOXI3A8MTJ6 420 aaPredicted RBP11.76□□□□□ -0.53
SDC2-201ENST00000302190 FTH1P19P0C7X4 201 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 MYOD1P15172 320 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 OR10J1P30954 320 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 BHLHA15Q7RTS1 189 aaPredicted RBP11.76□□□□□ -0.53
SDC2-201ENST00000302190 LHFPL4Q7Z7J7 247 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 ATOH7Q8N100 152 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 LINC00470Q9BZP3 86 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 FGF23Q9GZV9 251 aaPredicted RBP11.76□□□□□ -0.53
SDC2-201ENST00000302190 SPRR3Q9UBC9 169 aa11.76□□□□□ -0.53
SDC2-201ENST00000302190 A0A087WWC5 75 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 HELTA6NFD8 242 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 TPPP2P59282 170 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms