RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 MRPL54Q6P161 138 aaKnown RBP9.03□□□□□ -0.96
ZNF558-201ENST00000301475 ERASQ7Z444 233 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 KLHDC1Q8N7A1 406 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 TCTEX1D1Q8N7M0 179 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 ZBTB34Q8NCN2 500 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 SLC35D1Q9NTN3 355 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 MPC1Q9Y5U8 109 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 PSPNO60542 156 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 NXPH2O95156 264 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 ERVK11-1P61568 191 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 MAFAQ8NHW3 353 aaPredicted RBP9.03□□□□□ -0.96
ZNF558-201ENST00000301475 BET1LQ9NYM9 111 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 K7ESF4 209 aa9.02□□□□□ -0.96
ZNF558-201ENST00000301475 MPDU1O75352 247 aa9.02□□□□□ -0.96
ZNF558-201ENST00000301475 VASH2Q86V25 355 aa9.02□□□□□ -0.96
ZNF558-201ENST00000301475 TMEM45BQ96B21 275 aa9.02□□□□□ -0.96
ZNF558-201ENST00000301475 CDC42EP3Q9UKI2 254 aa9.02□□□□□ -0.96
ZNF558-201ENST00000301475 LY96Q9Y6Y9 160 aa9.02□□□□□ -0.96
ZNF558-201ENST00000301475 IGLC7A0M8Q6 106 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 KLF7O75840 302 aaPredicted RBP9.02□□□□□ -0.97
ZNF558-201ENST00000301475 EFNB3Q15768 340 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 AARDQ4LEZ3 155 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 WDR73Q6P4I2 378 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 SCCPDHQ8NBX0 429 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 OR4C5Q8NGB2 326 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 HES4Q9HCC6 221 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 IGHV1-69-2A0A0G2JMI3 117 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 CGAP01215 116 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 HBZP02008 142 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 REG1AP05451 166 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 TNFSF4P23510 183 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 ASPHD1Q5U4P2 390 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 STUMQ69YW2 141 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 PQLC2Q6ZP29 291 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 GALMQ96C23 342 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 LOXL4Q96JB6 756 aa9.02□□□□□ -0.97
ZNF558-201ENST00000301475 RIF1Q5UIP0 2472 aaKnown RBP9.01□□□□□ -0.97
ZNF558-201ENST00000301475 PRRC2CQ9Y520 2896 aaKnown RBP9.01□□□□□ -0.97
ZNF558-201ENST00000301475 PINLYPA6NC86 204 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 CDIPTO14735 213 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 MT-CO3P00414 261 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 GNG4P50150 75 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 SLAQ13239 276 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 C18orf32Q8TCD1 76 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 WDR54Q9H977 334 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 CNOT1A5YKK6 2376 aaKnown RBP9.01□□□□□ -0.97
ZNF558-201ENST00000301475 IGHV3-43A0A0B4J1X8 118 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 LY6G6EA0A0G2JKS1 128 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 TFF1P04155 84 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 CFIP05156 583 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 OR10J4P0C629 311 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 IGHV3-43DP0DP04 118 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 IGLL1P15814 213 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 ZNF146Q15072 292 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 EBLN2Q6P2I7 272 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 C19orf35Q6ZS72 473 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 TUSC5Q8IXB3 177 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 ZNF439Q8NDP4 499 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 IFI44Q8TCB0 444 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 Q8TCH9 128 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 TAAR6Q96RI8 345 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 GSX1Q9H4S2 264 aaPredicted RBP9.01□□□□□ -0.97
ZNF558-201ENST00000301475 RNF24Q9Y225 148 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 LSM4Q9Y4Z0 139 aaKnown RBP9.01□□□□□ -0.97
ZNF558-201ENST00000301475 U3KQA8 63 aa9.01□□□□□ -0.97
ZNF558-201ENST00000301475 CA1P00915 261 aaPredicted RBP9□□□□□ -0.97
ZNF558-201ENST00000301475 P04436 131 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 AMY1AP04745 511 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 CRYBB3P26998 211 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 RHOBP62745 196 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 RELBQ01201 579 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 Q56UQ5 140 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 SPATA12Q7Z6I5 190 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 ABHD12Q8N2K0 398 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 MUC15Q8N387 334 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 STPG3Q8N7X2 389 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 OR4P4Q8NGL7 312 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 MRGPRDQ8TDS7 321 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 NEUROG1Q92886 237 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 BORCS7Q96B45 105 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 KCNIP1Q9NZI2 227 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 AHRRA9YTQ3 701 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 PPBPP02775 128 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 SSTR5P35346 364 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 SRYQ05066 204 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 AESQ08117 197 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 VKORC1L1Q8N0U8 176 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 LINC00470Q9BZP3 86 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 TECRQ9NZ01 308 aaKnown RBP9□□□□□ -0.97
ZNF558-201ENST00000301475 SPTBN2O15020 2390 aa9□□□□□ -0.97
ZNF558-201ENST00000301475 LOC400499M0QZD8 3231 aa8.99□□□□□ -0.97
ZNF558-201ENST00000301475 IGKV3D-15A0A087WSY6 115 aa8.99□□□□□ -0.97
ZNF558-201ENST00000301475 DEFB108AA8MXU0 73 aa8.99□□□□□ -0.97
ZNF558-201ENST00000301475 PATE3B3GLJ2 98 aa8.99□□□□□ -0.97
ZNF558-201ENST00000301475 GFRA3O60609 400 aa8.99□□□□□ -0.97
ZNF558-201ENST00000301475 HLA-DQA1P01909 254 aa8.99□□□□□ -0.97
ZNF558-201ENST00000301475 GDF1P27539 372 aa8.99□□□□□ -0.97
ZNF558-201ENST00000301475 VDAC2P45880 294 aaPredicted RBP8.99□□□□□ -0.97
ZNF558-201ENST00000301475 TMPRSS3P57727 454 aa8.99□□□□□ -0.97
ZNF558-201ENST00000301475 TNXAQ16473 311 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms