RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 RPP21Q9H633 154 aaKnown RBP9.34□□□□□ -0.91
PBRM1-201ENST00000296302 TRAV9-2A0A087WT02 112 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 A0A1W2PS18 150 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 CCL1P22362 96 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 PCOLCEQ15113 449 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 DEFB124Q8NES8 71 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 OR9G1Q8NH87 305 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 PHLDA3Q9Y5J5 127 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 IGKV3D-11A0A0A0MRZ8 115 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 AHRRA9YTQ3 701 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 PRR32B1ATL7 298 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 CDX4O14627 284 aaPredicted RBP9.34□□□□□ -0.91
PBRM1-201ENST00000296302 ST6GALNAC3Q8NDV1 305 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 PIKFYVEQ9Y2I7 2098 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 C17orf98A8MV24 154 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 C1QTNF9BB2RNN3 333 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 ATP5LO75964 103 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 COX6A1P12074 109 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 SLC25A53Q5H9E4 307 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 PAQR4Q8N4S7 273 aaPredicted RBP9.34□□□□□ -0.91
PBRM1-201ENST00000296302 ST6GALNAC6Q969X2 333 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 C5orf30Q96GV9 206 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 MRPL13Q9BYD1 178 aaKnown RBP9.34□□□□□ -0.91
PBRM1-201ENST00000296302 WFDC1Q9HC57 220 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 ATG2BQ96BY7 2078 aa9.34□□□□□ -0.91
PBRM1-201ENST00000296302 AMBPP02760 352 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 SCGB1A1P11684 91 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 IGFBP2P18065 325 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 RELQ04864 619 aaPredicted RBP9.33□□□□□ -0.92
PBRM1-201ENST00000296302 FBLN7Q53RD9 439 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 BEND2Q8NDZ0 799 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 OSR1Q8TAX0 266 aaPredicted RBP9.33□□□□□ -0.92
PBRM1-201ENST00000296302 VCX2Q9H322 139 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 UBR3Q6ZT12 1888 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 A0A1B0GWB2 263 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 PRSS2P07478 247 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 LURAP1LQ8IV03 231 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 FMC1Q96HJ9 113 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 C1QTNF5Q9BXJ0 243 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 OSTCQ9NRP0 149 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 JKAMPQ9P055 326 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 RAXQ9Y2V3 346 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 RGPD3A6NKT7 1758 aaPredicted RBP9.33□□□□□ -0.92
PBRM1-201ENST00000296302 RGPD4Q7Z3J3 1758 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 TRBV20OR9-2A0A075B6H5 130 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 HTN1P15515 57 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 GPR183P32249 361 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 SPEM2Q0P670 501 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 OR10J3Q5JRS4 329 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 CACNG8Q8WXS5 425 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 GTF3AQ92664 365 aaKnown RBP9.33□□□□□ -0.92
PBRM1-201ENST00000296302 TRAV1-1A0A0B4J248 108 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 PROB1E7EW31 1015 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 H3BTX0 84 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 TNFSF13O75888 250 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 C1QTNF9P0C862 333 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 LOXL3P58215 753 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 C1orf185Q5T7R7 199 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 DNM1P46Q6ZS02 220 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 ARL6IP6Q8N6S5 226 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 AKIRIN1Q9H9L7 192 aaPredicted RBP9.33□□□□□ -0.92
PBRM1-201ENST00000296302 TMEM74BQ9NUR3 256 aa9.33□□□□□ -0.92
PBRM1-201ENST00000296302 TRAV8-6A0A0B4J262 113 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 SS18L1O75177 396 aaPredicted RBP9.32□□□□□ -0.92
PBRM1-201ENST00000296302 CXCL1P09341 107 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 STAG3L3P0CL85 134 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 NUTF2P61970 127 aaKnown RBP9.32□□□□□ -0.92
PBRM1-201ENST00000296302 PAPPA-AS1Q5QFB9 102 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 TCF23Q7RTU1 214 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 SLC25A45Q8N413 288 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 TPRP12270 2363 aaKnown RBP9.32□□□□□ -0.92
PBRM1-201ENST00000296302 PLXNB2O15031 1838 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 ALPK2Q86TB3 2170 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 TGFBR3LH3BV60 316 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 EMP1P54849 157 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 GFRA1P56159 465 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 DLX6P56179 175 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 LEAP2Q969E1 77 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 GNB1LQ9BYB4 327 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 TMEM160Q9NX00 188 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 MRPL16Q9NX20 251 aaKnown RBP9.32□□□□□ -0.92
PBRM1-201ENST00000296302 ANKRD36A6QL64 1941 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 MEF2CQ06413 473 aaPredicted RBP9.32□□□□□ -0.92
PBRM1-201ENST00000296302 CIRBPQ14011 172 aaKnown RBP9.32□□□□□ -0.92
PBRM1-201ENST00000296302 RPL39P5Q59GN2 51 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 LHFPL1Q86WI0 220 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 REPIN1Q9BWE0 567 aaKnown RBP9.32□□□□□ -0.92
PBRM1-201ENST00000296302 FAM106CPP0CH98 169 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 SAMD13Q5VXD3 122 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 ZNF441Q8N8Z8 693 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 GPR82Q96P67 336 aa9.32□□□□□ -0.92
PBRM1-201ENST00000296302 A0A087WV48 116 aa9.31□□□□□ -0.92
PBRM1-201ENST00000296302 EBLN2Q6P2I7 272 aa9.31□□□□□ -0.92
PBRM1-201ENST00000296302 ACP7Q6ZNF0 438 aa9.31□□□□□ -0.92
PBRM1-201ENST00000296302 KIR2DL4Q99706 377 aa9.31□□□□□ -0.92
PBRM1-201ENST00000296302 IGKV1-9A0A0C4DH69 117 aa9.31□□□□□ -0.92
PBRM1-201ENST00000296302 MOSP00540 346 aa9.31□□□□□ -0.92
PBRM1-201ENST00000296302 TM4SF20Q53R12 229 aa9.31□□□□□ -0.92
PBRM1-201ENST00000296302 C1orf194Q5T5A4 169 aa9.31□□□□□ -0.92
PBRM1-201ENST00000296302 WFDC3Q8IUB2 231 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms