RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FAM89BQ8N5H3 189 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 LEAP2Q969E1 77 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 SSBP3Q9BWW4 388 aaPredicted RBP11.37□□□□□ -0.59
HPS3-201ENST00000296051 ELOVL5Q9NYP7 299 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 COL4A6Q14031 1691 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 NAV3Q8IVL0 2385 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 RAB29O14966 203 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 OR2J3O76001 311 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 UCP1P25874 307 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 NHLH1Q02575 133 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 HGFACQ04756 655 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 TFF3Q07654 80 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 WDR73Q6P4I2 378 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 PQLC2Q6ZP29 291 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 TEX29Q8N6K0 151 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 FBLL1A6NHQ2 334 aaKnown RBP11.36□□□□□ -0.59
HPS3-201ENST00000296051 A6NNC1 897 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 RPL23P62829 140 aaKnown RBP11.36□□□□□ -0.59
HPS3-201ENST00000296051 BSPH1Q075Z2 132 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 C9orf106Q8NAJ2 232 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 IGKV1-12A0A0C4DH73 117 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 KLF7O75840 302 aaPredicted RBP11.36□□□□□ -0.59
HPS3-201ENST00000296051 CXorf1O96002 111 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 IGKV1D-12P01611 117 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 OR5AL1P0C617 328 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 HTR1DP28221 377 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 CYP2G1PQ6ZSU1 146 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 FA2HQ7L5A8 372 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 BMPERQ8N8U9 685 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 C14orf144Q96I85 54 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 NDUFAF3Q9BU61 184 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 CA11O75493 328 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 LINC00271P0C7V0 271 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 CD40P25942 277 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 SRIP30626 198 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 TEPPQ6URK8 271 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 PRSS3P2Q8NHM4 247 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 CRYBB3P26998 211 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 LBHQ53QV2 105 aaPredicted RBP11.36□□□□□ -0.59
HPS3-201ENST00000296051 RNF2Q99496 336 aa11.36□□□□□ -0.59
HPS3-201ENST00000296051 LOC105371242A0A075B767 164 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 AMBPP02760 352 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 FAM168AQ92567 244 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 FAM131CQ96AQ9 280 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 NPIPB13A6NJU9 1138 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 NPIPB4C9JG80 1138 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 APCSP02743 223 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 CECR9P0C854 216 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 C1QTNF9P0C862 333 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 GNLYP22749 145 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 FBLN5Q9UBX5 448 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 A0A087WWC5 75 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 SMIM17P0DL12 118 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 C18orf12Q96KH6 178 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 QTRT1Q9BXR0 403 aaKnown RBP11.35□□□□□ -0.59
HPS3-201ENST00000296051 NAPSAO96009 420 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 FAM106CPP0CH98 169 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 MPZP25189 248 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 GLRXP35754 106 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 RPL24P83731 157 aaKnown RBP11.35□□□□□ -0.59
HPS3-201ENST00000296051 FAM19A2Q8N3H0 131 aa11.35□□□□□ -0.59
HPS3-201ENST00000296051 FOXH1O75593 365 aa11.34□□□□□ -0.59
HPS3-201ENST00000296051 LOXL3P58215 753 aa11.34□□□□□ -0.59
HPS3-201ENST00000296051 LCN2P80188 198 aa11.34□□□□□ -0.59
HPS3-201ENST00000296051 MSRB2Q9Y3D2 182 aa11.34□□□□□ -0.59
HPS3-201ENST00000296051 IGF2RP11717 2491 aa11.34□□□□□ -0.59
HPS3-201ENST00000296051 KIR2DS2P43631 304 aa11.34□□□□□ -0.59
HPS3-201ENST00000296051 PAFAH1B2P68402 229 aa11.34□□□□□ -0.59
HPS3-201ENST00000296051 ZCCHC24Q8N2G6 241 aaKnown RBP11.34□□□□□ -0.59
HPS3-201ENST00000296051 ZNF525Q8N782 197 aa11.34□□□□□ -0.59
HPS3-201ENST00000296051 BCL2L2Q92843 193 aaPredicted RBP11.34□□□□□ -0.59
HPS3-201ENST00000296051 SSTR5P35346 364 aa11.34□□□□□ -0.59
HPS3-201ENST00000296051 QRFPP83859 136 aa11.34□□□□□ -0.59
HPS3-201ENST00000296051 JOSD1Q15040 202 aaPredicted RBP11.34□□□□□ -0.59
HPS3-201ENST00000296051 CDPF1Q6NVV7 123 aa11.34□□□□□ -0.59
HPS3-201ENST00000296051 hCG_38984A0A1B0GV85 526 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.33□□□□□ -0.59
HPS3-201ENST00000296051 MARCH11A6NNE9 402 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 F5H697 171 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 TMEM250H0YL14 139 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 RRHO14718 337 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 NEURL1O76050 574 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 CD99P14209 185 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 SPCS3P61009 180 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 WDFY1Q8IWB7 410 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 MMD2Q8IY49 270 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 OR1B1Q8NGR6 318 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 SFRP2Q96HF1 295 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 NPVFQ9HCQ7 196 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 TMEM167BQ9NRX6 74 aa11.33□□□□□ -0.59
HPS3-201ENST00000296051 ODAMA1E959 279 aa11.33□□□□□ -0.6
HPS3-201ENST00000296051 H3BTX0 84 aa11.33□□□□□ -0.6
HPS3-201ENST00000296051 WNT9BO14905 357 aa11.33□□□□□ -0.6
HPS3-201ENST00000296051 SLC25A53Q5H9E4 307 aa11.33□□□□□ -0.6
HPS3-201ENST00000296051 GCSAMLQ5JQS6 135 aa11.33□□□□□ -0.6
HPS3-201ENST00000296051 GTF2H5Q6ZYL4 71 aa11.33□□□□□ -0.6
HPS3-201ENST00000296051 RNASE6Q93091 150 aaKnown RBP11.33□□□□□ -0.6
HPS3-201ENST00000296051 ST6GALNAC6Q969X2 333 aa11.33□□□□□ -0.6
HPS3-201ENST00000296051 LRRC75BQ2VPJ9 315 aa11.33□□□□□ -0.6
HPS3-201ENST00000296051 FAM201AQ5SY85 155 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms