RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CCL17Q92583 94 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 LRBAP50851 2863 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 ZNF729A6NN14 1252 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 GFRA3O60609 400 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 SOD3P08294 240 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 PNRC1Q12796 327 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 TREML4Q6UXN2 200 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 TMEM170AQ8WVE7 144 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 WDR83OSQ9Y284 106 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 COL6A6A6NMZ7 2263 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 DPRXA6NFQ7 191 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 C11orf94C9JXX5 98 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 IGKV1-16P04430 117 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 CCL3L1P16619 93 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 RAB7AP51149 207 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 KRTCAP3Q53RY4 240 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 C16orf82Q7Z2V1 217 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 H1FXQ92522 213 aaKnown RBP12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 NAV3Q8IVL0 2385 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 ATP5G3P48201 142 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 NAT8Q9UHE5 227 aa12.99□□□□□ -0.33
NCKIPSD-201ENST00000294129 CGB3P0DN86 165 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 CGB7P0DN87 165 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 VDAC2P45880 294 aaPredicted RBP12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 CR1LQ2VPA4 569 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 Q8N7P7 452 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 MGST2Q99735 147 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 ENY2Q9NPA8 101 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 B4DEV8 164 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 PPP1R2P9O14990 202 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 KBTBD11O94819 623 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 GATA4P43694 442 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 RPP30P78346 268 aaKnown RBP12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 VWC2Q2TAL6 325 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 BSXQ3C1V8 233 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 ZNF600Q6ZNG1 722 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 DDB2Q92466 427 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 ELOVL1Q9BW60 279 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 IDI2-AS1Q9NZ38 188 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 PXMP4Q9Y6I8 212 aa12.98□□□□□ -0.33
NCKIPSD-201ENST00000294129 HNF1AP20823 631 aa12.97□□□□□ -0.33
NCKIPSD-201ENST00000294129 RPL23P62829 140 aaKnown RBP12.97□□□□□ -0.33
NCKIPSD-201ENST00000294129 ADIPOQQ15848 244 aa12.97□□□□□ -0.33
NCKIPSD-201ENST00000294129 DERL1Q9BUN8 251 aa12.97□□□□□ -0.33
NCKIPSD-201ENST00000294129 GAB2Q9UQC2 676 aa12.97□□□□□ -0.33
NCKIPSD-201ENST00000294129 CXorf65A6NEN9 183 aa12.97□□□□□ -0.33
NCKIPSD-201ENST00000294129 PGPEP1LA6NFU8 196 aa12.97□□□□□ -0.33
NCKIPSD-201ENST00000294129 GATCO43716 136 aaKnown RBP12.97□□□□□ -0.33
NCKIPSD-201ENST00000294129 TRGC1P0CF51 173 aa12.97□□□□□ -0.33
NCKIPSD-201ENST00000294129 ZNF788Q6ZQV5 615 aa12.97□□□□□ -0.33
NCKIPSD-201ENST00000294129 ABHD5Q8WTS1 349 aa12.97□□□□□ -0.33
NCKIPSD-201ENST00000294129 ZCCHC14Q8WYQ9 949 aaKnown RBP12.97□□□□□ -0.33
NCKIPSD-201ENST00000294129 FRZBQ92765 325 aa12.97□□□□□ -0.33
NCKIPSD-201ENST00000294129 C15orf61A6NNL5 157 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 ARL14EPLP0DKL9 152 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 FABP4P15090 132 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 NPY1RP25929 384 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 DEFA6Q01524 100 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 CYP2G1PQ6ZSU1 146 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 MOB3BQ86TA1 216 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 FAM222BQ8WU58 562 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 NEUROG1Q92886 237 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 SLC25A10Q9UBX3 287 aaPredicted RBP12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 SEC14L6B5MCN3 397 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 RBFOX2O43251 390 aaKnown RBP eCLIP12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 CA2P00918 260 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 RPL31P62899 125 aaKnown RBP12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 SLC24A4Q8NFF2 622 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 NEIL1Q96FI4 390 aaPredicted RBP12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 GGTLC1Q9BX51 225 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 SAP30LQ9HAJ7 183 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 MANBALQ9NQG1 85 aa12.96□□□□□ -0.33
NCKIPSD-201ENST00000294129 ACTL6BO94805 426 aa12.96□□□□□ -0.34
NCKIPSD-201ENST00000294129 CHRNA7P36544 502 aa12.96□□□□□ -0.34
NCKIPSD-201ENST00000294129 GPX4P36969 197 aaPredicted RBP12.96□□□□□ -0.34
NCKIPSD-201ENST00000294129 THBS3P49746 956 aa12.96□□□□□ -0.34
NCKIPSD-201ENST00000294129 Q8NA96 180 aa12.96□□□□□ -0.34
NCKIPSD-201ENST00000294129 SLC35D1Q9NTN3 355 aa12.96□□□□□ -0.34
NCKIPSD-201ENST00000294129 OR51B2Q9Y5P1 312 aa12.96□□□□□ -0.34
NCKIPSD-201ENST00000294129 H7BYZ3 331 aa12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 NPPCP23582 126 aa12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 KIR2DS2P43631 304 aa12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 PRB3Q04118 309 aaPredicted RBP12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 ARSJQ5FYB0 599 aaPredicted RBP12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 SPATA31B1PQ5VZV4 182 aa12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 HIST3H2BBQ8N257 126 aa12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 OR13D1Q8NGV5 346 aa12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 PRDM13Q9H4Q3 707 aa12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 SPTBN1Q01082 2364 aaKnown RBP12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 A0A1W2PPQ1 181 aa12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 SRRM4A7MD48 611 aaKnown RBP12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 C17orf100A8MU93 164 aa12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 NDUFB4O95168 129 aa12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 THBDP07204 575 aa12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 SPTBN4Q9H254 2564 aa12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 ANKHD1Q8IWZ3 2542 aaKnown RBP12.95□□□□□ -0.34
NCKIPSD-201ENST00000294129 NKX6-3A6NJ46 265 aa12.94□□□□□ -0.34
NCKIPSD-201ENST00000294129 TNFRSF1AP19438 455 aa12.94□□□□□ -0.34
NCKIPSD-201ENST00000294129 GAMTQ14353 236 aa12.94□□□□□ -0.34
NCKIPSD-201ENST00000294129 ZZEF1O43149 2961 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms