RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 MAGEA5P43359 124 aa10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 ERVFRD-1P60508 538 aa10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 MSGN1A6NI15 193 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 MC5RP33032 325 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 RPS20P60866 119 aaKnown RBP10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 HSPE1P61604 102 aaKnown RBP10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 RPL31P62899 125 aaKnown RBP10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 COL10A1Q03692 680 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 ZNF441Q8N8Z8 693 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 GALNT14Q96FL9 552 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 RCC1LQ96I51 464 aaKnown RBP10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 CLDN16Q9Y5I7 305 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 TRIOO75962 3097 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 GRIFINA4D1Z8 144 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 RNF222A6NCQ9 220 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 SRP19P09132 144 aaKnown RBP10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 ATP5IP56385 69 aaPredicted RBP10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 RIPPLY2Q5TAB7 128 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 TMUB1Q9BVT8 246 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 MS4A5Q9H3V2 200 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 CEP295Q9C0D2 2601 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 OR2H2O95918 312 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 ARL14EPLP0DKL9 152 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 MPV17P39210 176 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 KIAA1644Q3SXP7 199 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 OR8B2Q96RD0 313 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 ZDHHC8Q9ULC8 765 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 CCL21O00585 134 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 LIPFP07098 398 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 CD3EP07766 207 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 IL11P20809 199 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 TMEM177Q53S58 311 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 MUC15Q8N387 334 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 MAP1LC3AQ9H492 121 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 DNAJC4Q9NNZ3 241 aa10.07□□□□□ -0.8
SYNGAP1-201ENST00000293748 IGKV1D-42A0A075B6H8 117 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 NPIPB7O75200 414 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 CRYBB3P26998 211 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 MMDQ15546 238 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 TCF24Q7RTU0 167 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 WFIKKN1Q96NZ8 548 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 HIST1H4GQ99525 98 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 NDUFAF3Q9BU61 184 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 CHCHD2Q9Y6H1 151 aaPredicted RBP10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 A0A1B0GV72 72 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 PRB1P04280 392 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 RPL8P62917 257 aaKnown RBP10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 DNLZQ5SXM8 178 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 CCDC144NLQ6NUI1 221 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 RND1Q92730 232 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 SVILO95425 2214 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 LOC390937A0A1W2PQ73 354 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 SMAGPQ0VAQ4 97 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 FXYD3Q14802 87 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 TMEM136Q6ZRR5 245 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 ZNF843Q8N446 348 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 AUP1Q9Y679 476 aa10.06□□□□□ -0.8
SYNGAP1-201ENST00000293748 MARCH11A6NNE9 402 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 RNF224P0DH78 156 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 PSMG4Q5JS54 123 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 GATAD1Q8WUU5 269 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 SPOCK3Q9BQ16 436 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 MRPL32Q9BYC8 188 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 TRAV9-1A0A075B6T8 112 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 CBLN1P23435 193 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 KCNMB1Q16558 191 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 IZUMO4Q1ZYL8 232 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 TMEM78Q5T7P6 136 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 WDYHV1Q96HA8 205 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 F2RL2O00254 374 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 ZG16O60844 167 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 IGHMP01871 453 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 C3AR1Q16581 482 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 WDR31Q8NA23 367 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 PGLYRP4Q96LB8 373 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 TNFRSF19Q9NS68 423 aa10.05□□□□□ -0.8
SYNGAP1-201ENST00000293748 AHRRA9YTQ3 701 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 SSTR5P35346 364 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 NPBWR2P48146 333 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 DMRTA1Q5VZB9 504 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 S1PR2O95136 353 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 WISP1O95388 367 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 COX5BP10606 129 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 GCHFRP30047 84 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 ZNF818PQ6ZRF7 136 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 TPRX1Q8N7U7 411 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 OR51G1Q8NGK1 321 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 TCF19Q9Y242 345 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 A0A1W2PPE3 182 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 K7EM74 188 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 TTC32Q5I0X7 151 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 FAM57AQ8TBR7 257 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 ZNF703Q9H7S9 590 aaPredicted RBP10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 SLC25A10Q9UBX3 287 aaPredicted RBP10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 TRAV14DV4A0A0A6YYC5 116 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 A1L4Q6 167 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 OTX1P32242 354 aaPredicted RBP10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 C1orf185Q5T7R7 199 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 AMMECR1LQ6DCA0 310 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 NIT1Q86X76 327 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms