RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ELOBQ15370 118 aa13.77□□□□□ -0.21
CPSF4-201ENST00000292476 C17orf58Q2M2W7 97 aa13.77□□□□□ -0.21
CPSF4-201ENST00000292476 LCN15Q6UWW0 184 aa13.77□□□□□ -0.21
CPSF4-201ENST00000292476 SLC39A9Q9NUM3 307 aa13.77□□□□□ -0.21
CPSF4-201ENST00000292476 GFOD1Q9NXC2 390 aa13.77□□□□□ -0.21
CPSF4-201ENST00000292476 DSCAMO60469 2012 aa13.77□□□□□ -0.21
CPSF4-201ENST00000292476 MAST4O15021 2626 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 CSMD2Q7Z408 3487 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 ZFP92A6NM28 416 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 KIR2DS2P43631 304 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 RND2P52198 227 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 EFNA4P52798 201 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 CEBPGP53567 150 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 LOXL3P58215 753 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 RAB11AP62491 216 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 Q3ZCU0 254 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 OR8G2PQ6IF36 304 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 H1FXQ92522 213 aaKnown RBP13.76□□□□□ -0.21
CPSF4-201ENST00000292476 ZNF714Q96N38 554 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 CTDSP1Q9GZU7 261 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 MANBALQ9NQG1 85 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 GAB2Q9UQC2 676 aa13.76□□□□□ -0.21
CPSF4-201ENST00000292476 A0A1W2PPR1 153 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 TMEM250H0YL14 139 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 FBP1P09467 338 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 MDKP21741 143 aaPredicted RBP13.75□□□□□ -0.21
CPSF4-201ENST00000292476 FABP9Q0Z7S8 132 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 PDLIM3Q53GG5 364 aaPredicted RBP13.75□□□□□ -0.21
CPSF4-201ENST00000292476 LYPD2Q6UXB3 125 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 SSX7Q7RTT5 188 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 OR8B3Q8NGG8 313 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 OR52E5Q8NH55 327 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 OR8B2Q96RD0 313 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 SDF2L1Q9HCN8 221 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 PSG11Q9UQ72 335 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 TACC2O95359 2948 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 CSMD1Q96PZ7 3565 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 IGHV3-43A0A0B4J1X8 118 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 A0A1W2PPE3 182 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 MARCH11A6NNE9 402 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 C17orf112F2Z3M2 114 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 HPRT1P00492 218 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 IGHV3-43DP0DP04 118 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 GPR12P47775 334 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 RPP30P78346 268 aaKnown RBP13.75□□□□□ -0.21
CPSF4-201ENST00000292476 LTC4SQ16873 150 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 OR2B11Q5JQS5 317 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 RPP25LQ8N5L8 163 aaKnown RBP13.75□□□□□ -0.21
CPSF4-201ENST00000292476 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.75□□□□□ -0.21
CPSF4-201ENST00000292476 Q8WTZ3 238 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 NRGNQ92686 78 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 LHX4Q969G2 390 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 NEIL1Q96FI4 390 aaPredicted RBP13.75□□□□□ -0.21
CPSF4-201ENST00000292476 ZNF251Q9BRH9 671 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 CTSZQ9UBR2 303 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 ABCA4P78363 2273 aa13.75□□□□□ -0.21
CPSF4-201ENST00000292476 LINC00473A8K010 186 aa13.74□□□□□ -0.21
CPSF4-201ENST00000292476 LYNX1G3V0Z9 82 aa13.74□□□□□ -0.21
CPSF4-201ENST00000292476 LYNX1P0DP58 116 aa13.74□□□□□ -0.21
CPSF4-201ENST00000292476 FGF7P21781 194 aa13.74□□□□□ -0.21
CPSF4-201ENST00000292476 DUTP33316 252 aaKnown RBP13.74□□□□□ -0.21
CPSF4-201ENST00000292476 RPS10P46783 165 aaKnown RBP13.74□□□□□ -0.21
CPSF4-201ENST00000292476 ELLP55199 621 aaPredicted RBP13.74□□□□□ -0.21
CPSF4-201ENST00000292476 OR2B8PP59922 312 aa13.74□□□□□ -0.21
CPSF4-201ENST00000292476 TMEM249Q2WGJ8 235 aa13.74□□□□□ -0.21
CPSF4-201ENST00000292476 TMEM200BQ69YZ2 307 aa13.74□□□□□ -0.21
CPSF4-201ENST00000292476 BTNL3Q6UXE8 466 aa13.74□□□□□ -0.21
CPSF4-201ENST00000292476 ZNF709Q8N972 641 aa13.74□□□□□ -0.21
CPSF4-201ENST00000292476 R3HDM4Q96D70 268 aa13.74□□□□□ -0.21
CPSF4-201ENST00000292476 ACTR3CQ9C0K3 210 aaPredicted RBP13.74□□□□□ -0.21
CPSF4-201ENST00000292476 RPUSD1Q9UJJ7 312 aaKnown RBP13.74□□□□□ -0.21
CPSF4-201ENST00000292476 RAI1Q7Z5J4 1906 aaPredicted RBP13.74□□□□□ -0.21
CPSF4-201ENST00000292476 POLQO75417 2590 aa13.74□□□□□ -0.21
CPSF4-201ENST00000292476 KIAA2026Q5HYC2 2103 aa13.74□□□□□ -0.21
CPSF4-201ENST00000292476 TEX15Q9BXT5 2789 aa13.73□□□□□ -0.21
CPSF4-201ENST00000292476 LRBAP50851 2863 aa13.73□□□□□ -0.21
CPSF4-201ENST00000292476 CEBPZOSA8MTT3 80 aa13.73□□□□□ -0.21
CPSF4-201ENST00000292476 ZNF727A8MUV8 499 aa13.73□□□□□ -0.21
CPSF4-201ENST00000292476 CLDN34H7C241 214 aa13.73□□□□□ -0.21
CPSF4-201ENST00000292476 ST8SIA5O15466 376 aa13.73□□□□□ -0.21
CPSF4-201ENST00000292476 PSMB3P49720 205 aa13.73□□□□□ -0.21
CPSF4-201ENST00000292476 MEF2BQ02080 365 aaPredicted RBP13.73□□□□□ -0.21
CPSF4-201ENST00000292476 ACSM6Q6P461 480 aa13.73□□□□□ -0.21
CPSF4-201ENST00000292476 TCF23Q7RTU1 214 aa13.73□□□□□ -0.21
CPSF4-201ENST00000292476 GGACTQ9BVM4 153 aa13.73□□□□□ -0.21
CPSF4-201ENST00000292476 NAT8Q9UHE5 227 aa13.73□□□□□ -0.21
CPSF4-201ENST00000292476 HRNRQ86YZ3 2850 aaPredicted RBP13.73□□□□□ -0.21
CPSF4-201ENST00000292476 PCP4L1A6NKN8 68 aa13.72□□□□□ -0.21
CPSF4-201ENST00000292476 MPDU1O75352 247 aa13.72□□□□□ -0.21
CPSF4-201ENST00000292476 FGF8P55075 233 aaPredicted RBP13.72□□□□□ -0.21
CPSF4-201ENST00000292476 SPCS3P61009 180 aa13.72□□□□□ -0.21
CPSF4-201ENST00000292476 WDR25Q64LD2 544 aaPredicted RBP13.72□□□□□ -0.21
CPSF4-201ENST00000292476 CYP2G1PQ6ZSU1 146 aa13.72□□□□□ -0.21
CPSF4-201ENST00000292476 NPCDR1Q9BY65 106 aa13.72□□□□□ -0.21
CPSF4-201ENST00000292476 AKAP6Q13023 2319 aa13.72□□□□□ -0.21
CPSF4-201ENST00000292476 OVOL3O00110 214 aa13.72□□□□□ -0.21
CPSF4-201ENST00000292476 IGKV1D-33P01593 117 aa13.72□□□□□ -0.21
CPSF4-201ENST00000292476 IGKV1-33P01594 117 aa13.72□□□□□ -0.21
CPSF4-201ENST00000292476 OPN1MWP04001 364 aa13.72□□□□□ -0.21
CPSF4-201ENST00000292476 OPN1MW2P0DN77 364 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms