RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 OR10W1Q8NGF6 305 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 OR4P4Q8NGL7 312 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 OSR1Q8TAX0 266 aaPredicted RBP13.51□□□□□ -0.25
HIF3A-203ENST00000291300 CLEC7AQ9BXN2 247 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 PARD6GQ9BYG4 376 aaPredicted RBP13.51□□□□□ -0.25
HIF3A-203ENST00000291300 HIPK2Q9H2X6 1198 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 BET1LQ9NYM9 111 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 CSMD1Q96PZ7 3565 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 BUB1B-PAK6H3BSN5 160 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 H2AFB1P0C5Y9 115 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 OR8U8P0C7N1 319 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 CNTFRP26992 372 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 GPR6P46095 362 aaPredicted RBP13.51□□□□□ -0.25
HIF3A-203ENST00000291300 FAM71F2Q6NXP2 309 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 SFT2D1Q8WV19 159 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 PSMG3Q9BT73 122 aaPredicted RBP13.51□□□□□ -0.25
HIF3A-203ENST00000291300 F8W036 122 aa13.5□□□□□ -0.25
HIF3A-203ENST00000291300 LIPFP07098 398 aa13.5□□□□□ -0.25
HIF3A-203ENST00000291300 SFTA3P0C7M3 94 aa13.5□□□□□ -0.25
HIF3A-203ENST00000291300 DEFA4P12838 97 aa13.5□□□□□ -0.25
HIF3A-203ENST00000291300 DVL1P1P54792 670 aaPredicted RBP13.5□□□□□ -0.25
HIF3A-203ENST00000291300 RAB2AP61019 212 aa13.5□□□□□ -0.25
HIF3A-203ENST00000291300 MRGPRG-AS1Q2M3A8 158 aa13.5□□□□□ -0.25
HIF3A-203ENST00000291300 C10orf55Q5SWW7 151 aa13.5□□□□□ -0.25
HIF3A-203ENST00000291300 C10orf91Q5T1B1 145 aa13.5□□□□□ -0.25
HIF3A-203ENST00000291300 ETV3LQ6ZN32 361 aa13.5□□□□□ -0.25
HIF3A-203ENST00000291300 PINX1Q96BK5 328 aaKnown RBP13.5□□□□□ -0.25
HIF3A-203ENST00000291300 C1orf159Q96HA4 380 aa13.5□□□□□ -0.25
HIF3A-203ENST00000291300 PRNDQ9UKY0 176 aa13.5□□□□□ -0.25
HIF3A-203ENST00000291300 WASHC3Q9Y3C0 194 aa13.5□□□□□ -0.25
HIF3A-203ENST00000291300 CRYBG3Q68DQ2 2970 aa13.5□□□□□ -0.25
HIF3A-203ENST00000291300 CA2P00918 260 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 BTN1A1Q13410 526 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 PDPNQ86YL7 162 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 TMA7Q9Y2S6 64 aaKnown RBP13.49□□□□□ -0.25
HIF3A-203ENST00000291300 LOC105371242A0A075B767 164 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 A0A1B0GW64 132 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 CGB1A6NKQ9 187 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 ENSAO43768 121 aaKnown RBP13.49□□□□□ -0.25
HIF3A-203ENST00000291300 EFNA4P52798 201 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 FGF8P55075 233 aaPredicted RBP13.49□□□□□ -0.25
HIF3A-203ENST00000291300 PRCDQ00LT1 54 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 ATP6V1FQ16864 119 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 HCP5Q6MZN7 132 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 OR4C13Q8NGP0 309 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 NPCDR1Q9BY65 106 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 EIF5A2Q9GZV4 153 aaKnown RBP13.49□□□□□ -0.25
HIF3A-203ENST00000291300 WNK2Q9Y3S1 2297 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 NAV3Q8IVL0 2385 aa13.49□□□□□ -0.25
HIF3A-203ENST00000291300 A0A1W2PRD5 423 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 A0A1W2PRF3 423 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 A0A1W2PRM7 423 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 M6PRP20645 277 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 PRRX1P54821 245 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 SLC24A4Q8NFF2 622 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 RCC1LQ96I51 464 aaKnown RBP13.48□□□□□ -0.25
HIF3A-203ENST00000291300 CLCC1Q96S66 551 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 IGHV1-3A0A0C4DH29 117 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 LY6LH3BQJ8 138 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 OVOL3O00110 214 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 NUPL2O15504 423 aaKnown RBP13.48□□□□□ -0.25
HIF3A-203ENST00000291300 SLC25A17O43808 307 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 RBP4P02753 201 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 CD1BP29016 333 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 PPT1P50897 306 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 LCN15Q6UWW0 184 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 CENPVQ7Z7K6 275 aaPredicted RBP13.48□□□□□ -0.25
HIF3A-203ENST00000291300 MOB3BQ86TA1 216 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 RPP25LQ8N5L8 163 aaKnown RBP13.48□□□□□ -0.25
HIF3A-203ENST00000291300 BEND2Q8NDZ0 799 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 PCGF1Q9BSM1 259 aa13.48□□□□□ -0.25
HIF3A-203ENST00000291300 ZNF430Q9H8G1 570 aaPredicted RBP13.48□□□□□ -0.25
HIF3A-203ENST00000291300 A0A1W2PPH5 198 aa13.47□□□□□ -0.25
HIF3A-203ENST00000291300 SMCO3A2RU48 225 aa13.47□□□□□ -0.25
HIF3A-203ENST00000291300 HMGB3O15347 200 aaKnown RBP13.47□□□□□ -0.25
HIF3A-203ENST00000291300 IFNA4P05014 189 aa13.47□□□□□ -0.25
HIF3A-203ENST00000291300 NPY1RP25929 384 aa13.47□□□□□ -0.25
HIF3A-203ENST00000291300 HAGHQ16775 308 aa13.47□□□□□ -0.25
HIF3A-203ENST00000291300 ARSJQ5FYB0 599 aaPredicted RBP13.47□□□□□ -0.25
HIF3A-203ENST00000291300 TREML4Q6UXN2 200 aa13.47□□□□□ -0.25
HIF3A-203ENST00000291300 TNFRSF14Q92956 283 aa13.47□□□□□ -0.25
HIF3A-203ENST00000291300 ZNF257Q9Y2Q1 563 aa13.47□□□□□ -0.25
HIF3A-203ENST00000291300 CARHSP1Q9Y2V2 147 aaKnown RBP13.47□□□□□ -0.25
HIF3A-203ENST00000291300 IGHV4-39P01824 125 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 RPL8P62917 257 aaKnown RBP13.46□□□□□ -0.25
HIF3A-203ENST00000291300 SERF2P84101 59 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 MLANAQ16655 118 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 FBLN7Q53RD9 439 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 TMEM41BQ5BJD5 291 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 GCSAMLQ5JQS6 135 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 LHFPL4Q7Z7J7 247 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 ZNF843Q8N446 348 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 COMMD1Q8N668 190 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 TMEM167AQ8TBQ9 72 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 AIFM2Q9BRQ8 373 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 BPESC1Q9GZL8 116 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 PLEKHA3Q9HB20 300 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 WDR83OSQ9Y284 106 aa13.46□□□□□ -0.25
HIF3A-203ENST00000291300 FBP1P09467 338 aa13.46□□□□□ -0.26
HIF3A-203ENST00000291300 IL3RAP26951 378 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms