RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 IGHV1-18A0A0C4DH31 117 aa4.02□□□□□ -1.77
UBR1-201ENST00000290650 GNG7O60262 68 aa4.02□□□□□ -1.77
UBR1-201ENST00000290650 IGFBP2P18065 325 aa4.02□□□□□ -1.77
UBR1-201ENST00000290650 AMTP48728 403 aa4.02□□□□□ -1.77
UBR1-201ENST00000290650 DPPA3Q6W0C5 159 aa4.02□□□□□ -1.77
UBR1-201ENST00000290650 RCC1LQ96I51 464 aaKnown RBP4.02□□□□□ -1.77
UBR1-201ENST00000290650 ASCL2Q99929 193 aa4.02□□□□□ -1.77
UBR1-201ENST00000290650 MRPL37Q9BZE1 423 aaKnown RBP4.02□□□□□ -1.77
UBR1-201ENST00000290650 PARLQ9H300 379 aa4.02□□□□□ -1.77
UBR1-201ENST00000290650 SEBOXQ9HB31 216 aaPredicted RBP4.02□□□□□ -1.77
UBR1-201ENST00000290650 SLC45A2Q9UMX9 530 aa4.02□□□□□ -1.77
UBR1-201ENST00000290650 UFC1Q9Y3C8 167 aa4.02□□□□□ -1.77
UBR1-201ENST00000290650 LDLRAD4O15165 306 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 FGF16O43320 207 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 NDUFA2O43678 99 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 SMIM6P0DI80 62 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 TFPI2P48307 235 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 QRFPP83859 136 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 MEF2BQ02080 365 aaPredicted RBP4.01□□□□□ -1.77
UBR1-201ENST00000290650 PRR30Q53SZ7 412 aaPredicted RBP4.01□□□□□ -1.77
UBR1-201ENST00000290650 WDR82Q6UXN9 313 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 OR10W1Q8NGF6 305 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 GPR61Q9BZJ8 451 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 COL4A4P53420 1690 aaPredicted RBP4.01□□□□□ -1.77
UBR1-201ENST00000290650 C1QTNF9BB2RNN3 333 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 CA2P00918 260 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 RND2P52198 227 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 GFRA1P56159 465 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 VAMP3Q15836 100 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 C18orf12Q96KH6 178 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 RASL11BQ9BPW5 248 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 LIME1Q9H400 295 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 CYTL1Q9NRR1 136 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 ATRXP46100 2492 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 TRAV3A0A0B4J244 114 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 A0A1W2PN81 502 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 SCO2A0A1W2PP80 73 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 CGAP01215 116 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 CRISP2P16562 243 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 NUBP1P53384 320 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 ARL16Q0P5N6 197 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 ZNF600Q6ZNG1 722 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 PNKDQ8N490 385 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 VAMP8Q9BV40 100 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 MANBALQ9NQG1 85 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 ZNF586Q9NXT0 402 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 TCF19Q9Y242 345 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 PTPRQQ9UMZ3 2332 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 A0A0G2JRQ6 117 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 GFRA3O60609 400 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 CXorf1O96002 111 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 TPPP2P59282 170 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 LCN2P80188 198 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 P2RY6Q15077 328 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 TCF23Q7RTU1 214 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 H1FOOQ8IZA3 346 aaPredicted RBP4.01□□□□□ -1.77
UBR1-201ENST00000290650 OR5AU1Q8NGC0 362 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 NEUROG1Q92886 237 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 RNF2Q99496 336 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 PKIBQ9C010 78 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 TUBD1Q9UJT1 453 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 A0A087X0M5 115 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 A0A1B0GX30 115 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 DUXBA0A1W2PPF3 345 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 C20orf202A1L168 122 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 ZNF253O75346 499 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 CD40P25942 277 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 KIR2DS2P43631 304 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 RPL30P62888 115 aaKnown RBP4.01□□□□□ -1.77
UBR1-201ENST00000290650 OR1L8Q8NGR8 309 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 NPIPB3Q92617 1050 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 NEU1Q99519 415 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 NPVFQ9HCQ7 196 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 FKBP11Q9NYL4 201 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 IDI2-AS1Q9NZ38 188 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 IGLV3-32A0A0A0MS00 114 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 CDKN1AP38936 164 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 ATP6V1FQ16864 119 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 FAM166AQ6J272 317 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 STPG3Q8N7X2 389 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 WDR31Q8NA23 367 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 PAXXQ9BUH6 204 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 AAMDCQ9H7C9 122 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 GSN-AS1Q9NRJ2 163 aa4.01□□□□□ -1.77
UBR1-201ENST00000290650 WIPF3A6NGB9 483 aa4□□□□□ -1.77
UBR1-201ENST00000290650 C9JQL5 133 aa4□□□□□ -1.77
UBR1-201ENST00000290650 OR9G9P0C7N8 305 aa4□□□□□ -1.77
UBR1-201ENST00000290650 CCL1P22362 96 aa4□□□□□ -1.77
UBR1-201ENST00000290650 CBLN1P23435 193 aa4□□□□□ -1.77
UBR1-201ENST00000290650 KHDC3LQ587J8 217 aa4□□□□□ -1.77
UBR1-201ENST00000290650 OR4A47Q6IF82 309 aa4□□□□□ -1.77
UBR1-201ENST00000290650 DUX4L9Q6RFH8 374 aaPredicted RBP4□□□□□ -1.77
UBR1-201ENST00000290650 OR4F17Q8NGA8 305 aa4□□□□□ -1.77
UBR1-201ENST00000290650 RNF166Q96A37 237 aaPredicted RBP4□□□□□ -1.77
UBR1-201ENST00000290650 TMEM45BQ96B21 275 aa4□□□□□ -1.77
UBR1-201ENST00000290650 LINC00470Q9BZP3 86 aa4□□□□□ -1.77
UBR1-201ENST00000290650 WDR61Q9GZS3 305 aaKnown RBP4□□□□□ -1.77
UBR1-201ENST00000290650 MS4A5Q9H3V2 200 aa4□□□□□ -1.77
UBR1-201ENST00000290650 LOC102724200A0A096LPH7 203 aaPredicted RBP4□□□□□ -1.77
UBR1-201ENST00000290650 WISP2O76076 250 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms