RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ANOS1P23352 680 aa12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 NIT1Q86X76 327 aa12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 ZNF418Q8TF45 676 aaPredicted RBP12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 IGKV1D-13A0A0B4J2D9 117 aa12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 IGKV1-13P0DP09 117 aa12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 RPL23P62829 140 aaKnown RBP12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 TMEM78Q5T7P6 136 aa12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 TMEM70Q9BUB7 260 aa12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 IGKV1D-8A0A087WSZ0 117 aa12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 NDUFAF3Q9BU61 184 aa12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 RFNGQ9Y644 331 aa12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 MIR17HGQ75NE6 70 aa12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 VSIRQ9H7M9 311 aa12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 CHCHD2Q9Y6H1 151 aaPredicted RBP12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 SERF1AO75920 110 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 JPT1Q9UK76 154 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 OR4D5Q8NGN0 318 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 BEX4Q9NWD9 120 aaPredicted RBP12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 C1RLQ9NZP8 487 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 IGHV3-66A0A0C4DH42 116 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 A1L4Q6 167 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 PGPEP1LA6NFU8 196 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 C1QTNF9P0C862 333 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 PRR31Q5SQ13 230 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 ZNF525Q8N782 197 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 REG4Q9BYZ8 158 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 DOCK4Q8N1I0 1966 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 LOC390937A0A1W2PQ73 354 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 C12orf77C9JDV5 145 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 F8VVB4 439 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 F8VWA3 439 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 CX3CL1P78423 397 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 ZNF146Q15072 292 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 PAQR4Q8N4S7 273 aaPredicted RBP12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 OR51G1Q8NGK1 321 aa12.98□□□□□ -0.33
SHROOM4-201ENST00000289292 HBBP68871 147 aa12.97□□□□□ -0.33
SHROOM4-201ENST00000289292 RNASE7Q9H1E1 156 aaKnown RBP12.97□□□□□ -0.33
SHROOM4-201ENST00000289292 CXCL1P09341 107 aa12.97□□□□□ -0.33
SHROOM4-201ENST00000289292 TNS1Q9HBL0 1735 aaKnown RBP12.97□□□□□ -0.33
SHROOM4-201ENST00000289292 DOCK3Q8IZD9 2030 aa12.97□□□□□ -0.33
SHROOM4-201ENST00000289292 CYP2G1PQ6ZSU1 146 aa12.97□□□□□ -0.33
SHROOM4-201ENST00000289292 TGFAP01135 160 aa12.97□□□□□ -0.33
SHROOM4-201ENST00000289292 C1QL4Q86Z23 238 aa12.97□□□□□ -0.33
SHROOM4-201ENST00000289292 SIGLEC12Q96PQ1 595 aa12.97□□□□□ -0.33
SHROOM4-201ENST00000289292 TMEM160Q9NX00 188 aa12.97□□□□□ -0.33
SHROOM4-201ENST00000289292 TMEM250H0YL14 139 aa12.97□□□□□ -0.33
SHROOM4-201ENST00000289292 VENTXO95231 258 aa12.97□□□□□ -0.33
SHROOM4-201ENST00000289292 SELENOTP62341 195 aa12.97□□□□□ -0.33
SHROOM4-201ENST00000289292 LOC285556D6RIA3 1793 aa12.96□□□□□ -0.33
SHROOM4-201ENST00000289292 RELQ04864 619 aaPredicted RBP12.96□□□□□ -0.33
SHROOM4-201ENST00000289292 ACSF3Q4G176 576 aaPredicted RBP12.96□□□□□ -0.33
SHROOM4-201ENST00000289292 SAP25Q8TEE9 199 aa12.96□□□□□ -0.33
SHROOM4-201ENST00000289292 ZNF319Q9P2F9 582 aa12.96□□□□□ -0.33
SHROOM4-201ENST00000289292 IGKV1-9A0A0C4DH69 117 aa12.96□□□□□ -0.33
SHROOM4-201ENST00000289292 OR13A1Q8NGR1 328 aa12.96□□□□□ -0.33
SHROOM4-201ENST00000289292 IGHV3OR16-13A0A075B7E8 117 aa12.96□□□□□ -0.33
SHROOM4-201ENST00000289292 IGHV3-74A0A0B4J1X5 117 aa12.96□□□□□ -0.33
SHROOM4-201ENST00000289292 PRB3Q04118 309 aaPredicted RBP12.96□□□□□ -0.33
SHROOM4-201ENST00000289292 COLCA2A8K830 154 aa12.96□□□□□ -0.34
SHROOM4-201ENST00000289292 LCN2P80188 198 aa12.96□□□□□ -0.34
SHROOM4-201ENST00000289292 ADIPOQQ15848 244 aa12.96□□□□□ -0.34
SHROOM4-201ENST00000289292 MESP1Q9BRJ9 268 aa12.96□□□□□ -0.34
SHROOM4-201ENST00000289292 IGKV3D-11A0A0A0MRZ8 115 aa12.96□□□□□ -0.34
SHROOM4-201ENST00000289292 RAMP3O60896 148 aa12.96□□□□□ -0.34
SHROOM4-201ENST00000289292 UCP1P25874 307 aa12.96□□□□□ -0.34
SHROOM4-201ENST00000289292 TSPAN7P41732 249 aa12.96□□□□□ -0.34
SHROOM4-201ENST00000289292 SSBP4Q9BWG4 385 aaPredicted RBP12.96□□□□□ -0.34
SHROOM4-201ENST00000289292 TRAV8-6A0A0B4J262 113 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 FGF16O43320 207 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 CELA3BP08861 270 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 TUBA4BQ9H853 241 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 LAMTOR2Q9Y2Q5 125 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 OR10J6PQ8NGY7 276 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 SPOCK3Q9BQ16 436 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 PMCHL2Q9BQD1 86 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 FNDC4Q9H6D8 234 aaPredicted RBP12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 SCGB1A1P11684 91 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 MC5RP33032 325 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 PTGDSP41222 190 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 HEPN1Q6WQI6 88 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 ACP7Q6ZNF0 438 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 PRR33A8MZF0 331 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 DLX6P56179 175 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 GNG5P63218 68 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 RIPPLY2Q5TAB7 128 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 PLPPR1Q8TBJ4 325 aa12.95□□□□□ -0.34
SHROOM4-201ENST00000289292 APOHP02749 345 aaPredicted RBP12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 TMEM170AQ8WVE7 144 aa12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 A0A1B0GV72 72 aa12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 FOXI3A8MTJ6 420 aaPredicted RBP12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 FAM131CQ96AQ9 280 aa12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 METTL26Q96S19 204 aa12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 HIST1H2BLQ99880 126 aa12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 FAM53AQ6NSI3 398 aaPredicted RBP12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 UNQ5815/PRO19632Q6UWF5 114 aa12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 LHFPL4Q7Z7J7 247 aa12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 DERL1Q9BUN8 251 aa12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 MRPL32Q9BYC8 188 aaKnown RBP12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 NRN1Q9NPD7 142 aa12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 DEPPQ9NTK1 212 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms