RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ZNF703Q9H7S9 590 aaPredicted RBP11.21□□□□□ -0.62
SCAF4-201ENST00000286835 POLR3KQ9Y2Y1 108 aaPredicted RBP11.21□□□□□ -0.62
SCAF4-201ENST00000286835 WNK2Q9Y3S1 2297 aa11.21□□□□□ -0.62
SCAF4-201ENST00000286835 CDX4O14627 284 aaPredicted RBP11.2□□□□□ -0.62
SCAF4-201ENST00000286835 RAB29O14966 203 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 NUPR1O60356 82 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 GATA2P23769 480 aaPredicted RBP11.2□□□□□ -0.62
SCAF4-201ENST00000286835 FAM19A2Q8N3H0 131 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 FAM122AQ96E09 287 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 KCNIP2Q9NS61 270 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 RRHO14718 337 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 SPRY3O43610 288 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 MMD2Q8IY49 270 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 SH2D2AQ9NP31 389 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 TMEM106BQ9NUM4 274 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 LY6G6EA0A0G2JKS1 128 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 CGAP01215 116 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 CLDN18P56856 261 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 PSG7Q13046 419 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 Q6P435 159 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 COLCA1Q6ZS62 124 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 ZBTB34Q8NCN2 500 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 SGK494Q96LW2 274 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 TMEM68Q96MH6 324 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 SSBP3Q9BWW4 388 aaPredicted RBP11.2□□□□□ -0.62
SCAF4-201ENST00000286835 U3KQA8 63 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 SPTBN4Q9H254 2564 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 TNCP24821 2201 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 SIAH2O43255 324 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 IGHV3-48P01763 117 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 OR9G9P0C7N8 305 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 NPY1RP25929 384 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 RNASEKQ6P5S7 137 aaKnown RBP11.2□□□□□ -0.62
SCAF4-201ENST00000286835 NGBQ9NPG2 151 aa11.2□□□□□ -0.62
SCAF4-201ENST00000286835 ARFGEF3Q5TH69 2177 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 LINC00473A8K010 186 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 GGCTO75223 188 aaKnown RBP11.19□□□□□ -0.62
SCAF4-201ENST00000286835 OR5G3P0C626 314 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 MPV17P39210 176 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 GFRA1P56159 465 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 ZNF718Q3SXZ3 478 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 SPATA31B1PQ5VZV4 182 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 TEPPQ6URK8 271 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 KLF14Q8TD94 323 aaPredicted RBP11.19□□□□□ -0.62
SCAF4-201ENST00000286835 PPIAL4AQ9Y536 164 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 RBFOX2O43251 390 aaKnown RBP eCLIP11.19□□□□□ -0.625e-7■■□□□ 14.3
SCAF4-201ENST00000286835 TOX4O94842 621 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 COX5BP10606 129 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 Q6ZSR3 168 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 TMEM45BQ96B21 275 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 RNASE7Q9H1E1 156 aaKnown RBP11.19□□□□□ -0.62
SCAF4-201ENST00000286835 METRNQ9UJH8 293 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 HINT1P49773 126 aaPredicted RBP11.19□□□□□ -0.62
SCAF4-201ENST00000286835 PTTG1IPP53801 180 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 SPATA45Q537H7 98 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 LINC00470Q9BZP3 86 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 NPVFQ9HCQ7 196 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 CBY1Q9Y3M2 126 aa11.19□□□□□ -0.62
SCAF4-201ENST00000286835 SRIP30626 198 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 BEND2Q8NDZ0 799 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 RNASEH2CQ8TDP1 164 aaKnown RBP11.18□□□□□ -0.62
SCAF4-201ENST00000286835 AGMATQ9BSE5 352 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 PRR33A8MZF0 331 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 M0QZK8 103 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 GCHFRP30047 84 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 SRSF7Q16629 238 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCAF4-201ENST00000286835 TDRG1Q3Y452 100 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 ARSJQ5FYB0 599 aaPredicted RBP11.18□□□□□ -0.62
SCAF4-201ENST00000286835 TMEM140Q9NV12 185 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 BRS3P32247 399 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 CDKN1AP38936 164 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 PAFAH1B2P68402 229 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 Q56UQ5 140 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 C1orf194Q5T5A4 169 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 STPG3Q8N7X2 389 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 ZNRF1Q8ND25 227 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 PLCE1Q9P212 2302 aa11.18□□□□□ -0.62
SCAF4-201ENST00000286835 NPPCP23582 126 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 TRAT1Q6PIZ9 186 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 RND1Q92730 232 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 PRO3102Q9H379 93 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 TBL2Q9Y4P3 447 aaKnown RBP11.17□□□□□ -0.62
SCAF4-201ENST00000286835 TLN1Q9Y490 2541 aaKnown RBP11.17□□□□□ -0.62
SCAF4-201ENST00000286835 TIMP3P35625 211 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 CENPWQ5EE01 88 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 ASPHD1Q5U4P2 390 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 CXXC4Q9H2H0 198 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 ELOVL5Q9NYP7 299 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 TCF19Q9Y242 345 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 TRAV3A0A0B4J244 114 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 SMPD2O60906 423 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 CA1P00915 261 aaPredicted RBP11.17□□□□□ -0.62
SCAF4-201ENST00000286835 USF1P22415 310 aaPredicted RBP11.17□□□□□ -0.62
SCAF4-201ENST00000286835 PRDX2P32119 198 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 DAZAP2Q15038 168 aaPredicted RBP11.17□□□□□ -0.62
SCAF4-201ENST00000286835 ERASQ7Z444 233 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 OR5B3Q8NH48 314 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 SEPSECSQ9HD40 501 aaKnown RBP11.17□□□□□ -0.62
SCAF4-201ENST00000286835 ARL2-SNX15V9GYD0 113 aa11.17□□□□□ -0.62
SCAF4-201ENST00000286835 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.17□□□□□ -0.622e-7■■■□□ 16.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms