RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 HOXA4Q00056 320 aaPredicted RBP9.43□□□□□ -0.9
SIRPB1-202ENST00000279477 RPL39P5Q59GN2 51 aa9.43□□□□□ -0.9
SIRPB1-202ENST00000279477 STUMQ69YW2 141 aa9.43□□□□□ -0.9
SIRPB1-202ENST00000279477 TREML4Q6UXN2 200 aa9.43□□□□□ -0.9
SIRPB1-202ENST00000279477 Q8N7P7 452 aa9.43□□□□□ -0.9
SIRPB1-202ENST00000279477 ZNRF1Q8ND25 227 aa9.43□□□□□ -0.9
SIRPB1-202ENST00000279477 OR51G1Q8NGK1 321 aa9.43□□□□□ -0.9
SIRPB1-202ENST00000279477 NPVFQ9HCQ7 196 aa9.43□□□□□ -0.9
SIRPB1-202ENST00000279477 PRNDQ9UKY0 176 aa9.43□□□□□ -0.9
SIRPB1-202ENST00000279477 FAM215AQ9Y5M1 114 aa9.43□□□□□ -0.9
SIRPB1-202ENST00000279477 XKRY2A2RUG3 117 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 NKX6-3A6NJ46 265 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 ZNF705GA8MUZ8 300 aaPredicted RBP9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 PRSS46E5RG02 174 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 HMGB3O15347 200 aaKnown RBP9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 RANP62826 216 aaKnown RBP9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 LCN2P80188 198 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 MSMPQ1L6U9 139 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 C17orf58Q2M2W7 97 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 SLC24A4Q8NFF2 622 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 NUP37Q8NFH4 326 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 TMEM170AQ8WVE7 144 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 IMMP2LQ96T52 175 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 GGTLC1Q9BX51 225 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 LINC00574Q9H8X3 128 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 TMEM14BQ9NUH8 114 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 IDI2-AS1Q9NZ38 188 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 PXMP4Q9Y6I8 212 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 HCFC1P51610 2035 aa9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 HEATR1Q9H583 2144 aaKnown RBP9.42□□□□□ -0.9
SIRPB1-202ENST00000279477 TYMSP04818 313 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 NPY1RP25929 384 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 CEACAM8P31997 349 aaPredicted RBP9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 HSPE1P61604 102 aaKnown RBP9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 RTP5Q14D33 572 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 RTL8BQ17RB0 113 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 CISD2Q8N5K1 135 aaKnown RBP9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 OR4X1Q8NH49 305 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 ZNF257Q9Y2Q1 563 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 ARL2-SNX15V9GYD0 113 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 SAA2-SAA4A0A096LPE2 208 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 RPLP1P05386 114 aaKnown RBP9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 STAG3L2P0CL84 134 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 STAG3L3P0CL85 134 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 SAA2P0DJI9 122 aaPredicted RBP9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 RHOBP62745 196 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 MRPS11P82912 194 aaKnown RBP9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 TEPPQ6URK8 271 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 UNQ6494/PRO21346Q6UXR6 183 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 FAM57AQ8TBR7 257 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 MS4A5Q9H3V2 200 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 FKBP11Q9NYL4 201 aa9.41□□□□□ -0.9
SIRPB1-202ENST00000279477 RRHO14718 337 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 TNFRSF1AP19438 455 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 ZNF134P52741 427 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 LINC00205P59089 165 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 C4orf17Q53FE4 359 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 CT45A1Q5HYN5 189 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 C1orf194Q5T5A4 169 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 VHLLQ6RSH7 139 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 MRPL41Q8IXM3 137 aaKnown RBP9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 ZNF439Q8NDP4 499 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 OR2T10Q8NGZ9 312 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 CT45A3Q8NHU0 189 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 MGST2Q99735 147 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 GCM1Q9NP62 436 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 LSM4Q9Y4Z0 139 aaKnown RBP9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 ASPMQ8IZT6 3477 aa9.4□□□□□ -0.9
SIRPB1-202ENST00000279477 KIR2DL5BA0A0G2JN68 375 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 KIR2DL5BA0A0G2JPC4 375 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 hADV38S2A0JD32 116 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 IGHV1-46P01743 117 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 OR10J1P30954 320 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 RPS16P62249 146 aaKnown RBP9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 TEX36Q5VZQ5 186 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 CST9LP1Q5W188 147 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 OR4A47Q6IF82 309 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 TMEM108Q6UXF1 575 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 ZNF788Q6ZQV5 615 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 KIR2DL5AQ8N109 375 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 GAFA1Q96PS6 74 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 GAL3ST2Q9H3Q3 398 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 GOLT1BQ9Y3E0 138 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 DSCAML1Q8TD84 2053 aa9.4□□□□□ -0.91
SIRPB1-202ENST00000279477 TRAV38-1A0A0B4J264 116 aa9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 CD40P25942 277 aa9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 RPL29P47914 159 aaKnown RBP9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 TDGF1P3P51864 188 aa9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 CASP6P55212 293 aa9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 ALKBH2Q6NS38 261 aa9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 LYG1Q8N1E2 194 aa9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 GATAD1Q8WUU5 269 aa9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 PLPPR2Q96GM1 343 aa9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 ELOVL5Q9NYP7 299 aa9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 LINC00312Q9Y6C7 94 aa9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 DIDO1Q9BTC0 2240 aaKnown RBP9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 MDFIC2A0A1B0GVS7 189 aa9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 DLEU1O43261 78 aa9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 SNRPCP09234 159 aaKnown RBP9.39□□□□□ -0.91
SIRPB1-202ENST00000279477 ARL14EPLP0DKL9 152 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms