RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 VDAC2P45880 294 aaPredicted RBP14.61□□□□□ -0.07
CAPN1-201ENST00000279247 CLDND2Q8NHS1 167 aa14.61□□□□□ -0.07
CAPN1-201ENST00000279247 PSMG3Q9BT73 122 aaPredicted RBP14.61□□□□□ -0.07
CAPN1-201ENST00000279247 LINC00574Q9H8X3 128 aa14.61□□□□□ -0.07
CAPN1-201ENST00000279247 NDUFS7O75251 213 aa14.61□□□□□ -0.07
CAPN1-201ENST00000279247 CDKN1AP38936 164 aa14.61□□□□□ -0.07
CAPN1-201ENST00000279247 SERF2P84101 59 aa14.61□□□□□ -0.07
CAPN1-201ENST00000279247 C10orf55Q5SWW7 151 aa14.61□□□□□ -0.07
CAPN1-201ENST00000279247 A0A1W2PRD5 423 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 A0A1W2PRF3 423 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 A0A1W2PRM7 423 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 CA2P00918 260 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 HBE1P02100 147 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 ARG1P05089 322 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 IGHV1-8P0DP01 117 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 HSPE1P61604 102 aaKnown RBP14.6□□□□□ -0.07
CAPN1-201ENST00000279247 MOB3BQ86TA1 216 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 LRRK2Q5S007 2527 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 A0A1W2PPR1 153 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 TMEM155Q4W5P6 130 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 GATAD1Q8WUU5 269 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 ONECUT1Q9UBC0 465 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 CHD6Q8TD26 2715 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 LOC105371267A0A1B0GV96 52 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 C7orf77A4D0Y5 90 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 SFTPCP11686 197 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 NPY1RP25929 384 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 ATP6V1FQ16864 119 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 TGIF2LXQ8IUE1 241 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 SLC24A4Q8NFF2 622 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 C17orf50Q8WW18 174 aa14.6□□□□□ -0.07
CAPN1-201ENST00000279247 FLYWCH2Q96CP2 140 aaKnown RBP14.6□□□□□ -0.07
CAPN1-201ENST00000279247 H0YJW9 148 aa14.59□□□□□ -0.07
CAPN1-201ENST00000279247 IGHV3-48P01763 117 aa14.59□□□□□ -0.07
CAPN1-201ENST00000279247 RITA1Q96K30 269 aa14.59□□□□□ -0.07
CAPN1-201ENST00000279247 PLEKHA3Q9HB20 300 aa14.59□□□□□ -0.07
CAPN1-201ENST00000279247 GAB2Q9UQC2 676 aa14.59□□□□□ -0.07
CAPN1-201ENST00000279247 MLANAQ16655 118 aa14.59□□□□□ -0.07
CAPN1-201ENST00000279247 MIC13Q5XKP0 118 aa14.59□□□□□ -0.07
CAPN1-201ENST00000279247 ZNF833PQ6ZTB9 187 aa14.59□□□□□ -0.07
CAPN1-201ENST00000279247 SIRT7Q9NRC8 400 aa14.59□□□□□ -0.07
CAPN1-201ENST00000279247 SRP19P09132 144 aaKnown RBP14.58□□□□□ -0.07
CAPN1-201ENST00000279247 GNB2P62879 340 aa14.58□□□□□ -0.07
CAPN1-201ENST00000279247 RPP30P78346 268 aaKnown RBP14.58□□□□□ -0.07
CAPN1-201ENST00000279247 RAB1BQ9H0U4 201 aa14.58□□□□□ -0.07
CAPN1-201ENST00000279247 UBTD1Q9HAC8 227 aa14.58□□□□□ -0.07
CAPN1-201ENST00000279247 TMEM14BQ9NUH8 114 aa14.58□□□□□ -0.07
CAPN1-201ENST00000279247 PPIAL4CA0A0B4J2A2 164 aa14.58□□□□□ -0.08
CAPN1-201ENST00000279247 BTBD17A6NE02 478 aa14.58□□□□□ -0.08
CAPN1-201ENST00000279247 PPIAL4GP0DN37 164 aa14.58□□□□□ -0.08
CAPN1-201ENST00000279247 ZNF429Q86V71 674 aa14.58□□□□□ -0.08
CAPN1-201ENST00000279247 RAB39BQ96DA2 213 aa14.58□□□□□ -0.08
CAPN1-201ENST00000279247 KAAG1Q9UBP8 84 aa14.58□□□□□ -0.08
CAPN1-201ENST00000279247 SLC25A17O43808 307 aa14.58□□□□□ -0.08
CAPN1-201ENST00000279247 KBTBD11O94819 623 aa14.58□□□□□ -0.08
CAPN1-201ENST00000279247 PDLIM3Q53GG5 364 aaPredicted RBP14.58□□□□□ -0.08
CAPN1-201ENST00000279247 TREML4Q6UXN2 200 aa14.58□□□□□ -0.08
CAPN1-201ENST00000279247 C11orf42Q8N5U0 333 aa14.58□□□□□ -0.08
CAPN1-201ENST00000279247 TPSG1Q9NRR2 321 aa14.58□□□□□ -0.08
CAPN1-201ENST00000279247 A0A1W2PPE2 198 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 E7EUB6 86 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 UPK2O00526 184 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 ARF6P62330 175 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 ZNF674Q2M3X9 581 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 ZFP82Q8N141 532 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 OR9G1Q8NH87 305 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 RAB24Q969Q5 203 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 COMMD5Q9GZQ3 224 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 TMEM133Q9H2Q1 129 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 TMEM8BA6NDV4 472 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 NDUFA2O43678 99 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 DLX6P56179 175 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 DHRS7BQ6IAN0 325 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-201ENST00000279247 NABP2Q9BQ15 211 aa14.57□□□□□ -0.08
CAPN1-201ENST00000279247 FOXA2Q9Y261 457 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-201ENST00000279247 TEX50A0A1B0GTY4 177 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 FAM90A9PA6NNJ1 464 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 H3BQ15 152 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 BCL2P10415 239 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 DPPA3Q6W0C5 159 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 OR52E5Q8NH55 327 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 PRNDQ9UKY0 176 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 LOC102723971A0A1B0GUV8 181 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 ZNF727A8MUV8 499 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 IGHV2-70P01814 119 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 REG1AP05451 166 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 UBE2G2P60604 165 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 KIAA0141Q14154 515 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-201ENST00000279247 ZNF506Q5JVG8 444 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 ZNF841Q6ZN19 808 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 FAM216AQ8WUB2 273 aa14.56□□□□□ -0.08
CAPN1-201ENST00000279247 C17orf112F2Z3M2 114 aa14.55□□□□□ -0.08
CAPN1-201ENST00000279247 C19orf84I3L1E1 186 aa14.55□□□□□ -0.08
CAPN1-201ENST00000279247 ARSJQ5FYB0 599 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-201ENST00000279247 CBLN4Q9NTU7 201 aa14.55□□□□□ -0.08
CAPN1-201ENST00000279247 WDR83OSQ9Y284 106 aa14.55□□□□□ -0.08
CAPN1-201ENST00000279247 OR8B3Q8NGG8 313 aa14.55□□□□□ -0.08
CAPN1-201ENST00000279247 OR8B2Q96RD0 313 aa14.55□□□□□ -0.08
CAPN1-201ENST00000279247 MGST2Q99735 147 aa14.55□□□□□ -0.08
CAPN1-201ENST00000279247 IGHV2-26A0A0B4J1V2 119 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms