RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 CEACAM21Q3KPI0 293 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 GFRALQ6UXV0 394 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 LINC00336Q6ZUF6 198 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 MOB3BQ86TA1 216 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 LRRC75AQ8NAA5 344 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 OR5B3Q8NH48 314 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 DTD1Q8TEA8 209 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 TMEM18Q96B42 140 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 KLHDC3Q9BQ90 382 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 CXXC4Q9H2H0 198 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 PRO1933Q9H354 126 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 PARP11Q9NR21 331 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 PILRBQ9UKJ0 227 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 TRAPPC1Q9Y5R8 145 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 KIF26BQ2KJY2 2108 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 AKAP6Q13023 2319 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 IGHV3OR15-7A0A075B7D8 119 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 MPTX1A8MV57 137 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 C21orf140B9A014 251 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 J3QT63 122 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 CCL24O00175 119 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 MFNGO00587 321 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 NDUFB3O43676 98 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 COX7A2P2O60397 106 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 DEDDO75618 318 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 TSPAN13O95857 204 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 ACTL6AO96019 429 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 FABP1P07148 127 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 HKR1P10072 659 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 COX6A1P12074 109 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 KLK2P20151 261 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 RAB5AP20339 215 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 CDC34P49427 236 aaPredicted RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 SUMO2P61956 95 aaKnown RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 TNFAIP6P98066 277 aaPredicted RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 COTL1Q14019 142 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 IGFBP7Q16270 282 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 ZNF562Q6V9R5 426 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 ZNF826PQ6ZT77 177 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 TIPARPQ7Z3E1 657 aaKnown RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 S100A7AQ86SG5 101 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 TMEM252Q8N6L7 170 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 SIGLECL1Q8N7X8 197 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 NRIP2Q9BQI9 281 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 TMPRSS5Q9H3S3 457 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 GNB4Q9HAV0 340 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 IL36GQ9NZH8 169 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 DOK5Q9P104 306 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 CLN8Q9UBY8 286 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 NAGKQ9UJ70 344 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 RNF24Q9Y225 148 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 ACACAQ13085 2346 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 ZFYVE26Q68DK2 2539 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 CRYABP02511 175 aaKnown RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 CD74P04233 296 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 GZMHP20718 246 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 MDKP21741 143 aaPredicted RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 F2RP25116 425 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 OPRK1P41145 380 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 KRTDAPP60985 99 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 MRPS11P82912 194 aaKnown RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 FAM3AP98173 230 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 UBE2V1Q13404 147 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 BSXQ3C1V8 233 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 LRRC10Q5BKY1 277 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 ATP1A1-AS1Q5TC04 95 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 NUFIP2Q7Z417 695 aaKnown RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 MYPOPQ86VE0 399 aaPredicted RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 OR4A4PQ8NGN8 299 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 TIMD4Q96H15 378 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 ZNF251Q9BRH9 671 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 TMEM204Q9BSN7 226 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 RSG1Q9BU20 258 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 RSPO3Q9BXY4 272 aaPredicted RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 MAP6D1Q9H9H5 199 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 RNF122Q9H9V4 155 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 LPAR2Q9HBW0 351 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 TPSG1Q9NRR2 321 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 TECRQ9NZ01 308 aaKnown RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 CHCHD2Q9Y6H1 151 aaPredicted RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 NBASA2RRP1 2371 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 RAI1Q7Z5J4 1906 aaPredicted RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 RANBP2P49792 3224 aaKnown RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 A0A1B0GU03 582 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 LOC390937A0A1W2PQ73 354 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 MSGN1A6NI15 193 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 CRYM-AS1A6NIL9 109 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 C11orf94C9JXX5 98 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 TGOLN2O43493 480 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 NDUFA2O43678 99 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 ZIC3O60481 467 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 PGLYRP1O75594 196 aaPredicted RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 SNRPCP09234 159 aaKnown RBP2.4□□□□□ -2.03
HERC4-201ENST00000277817 FREM3P0C091 2139 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 STAG3L2P0CL84 134 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 CHRNB4P30926 498 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 SULT1A2P50226 295 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 FGF12P61328 243 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 SAPCD1Q5SSQ6 148 aa2.4□□□□□ -2.03
HERC4-201ENST00000277817 FAM78BQ5VT40 261 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms