RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 IFNA10P01566 189 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 FABP6P51161 128 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 ERVK-16P61578 105 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 PKIAP61925 76 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 OR2T10Q8NGZ9 312 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 OR1P1Q8NH06 330 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 OR4A16Q8NH70 328 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 METRNQ9UJH8 293 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 FAM215AQ9Y5M1 114 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 A0A1W2PPV4 95 aa10.67□□□□□ -0.7
C9orf3-201ENST00000277198 OR9G9P0C7N8 305 aa10.67□□□□□ -0.7
C9orf3-201ENST00000277198 DEFA6Q01524 100 aa10.67□□□□□ -0.7
C9orf3-201ENST00000277198 JOSD1Q15040 202 aaPredicted RBP10.67□□□□□ -0.7
C9orf3-201ENST00000277198 FAM53AQ6NSI3 398 aaPredicted RBP10.67□□□□□ -0.7
C9orf3-201ENST00000277198 VWA1Q6PCB0 445 aa10.67□□□□□ -0.7
C9orf3-201ENST00000277198 C9orf106Q8NAJ2 232 aa10.67□□□□□ -0.7
C9orf3-201ENST00000277198 RFESDQ8TAC1 157 aa10.67□□□□□ -0.7
C9orf3-201ENST00000277198 S100PBPQ96BU1 408 aa10.67□□□□□ -0.7
C9orf3-201ENST00000277198 MSL2Q9HCI7 577 aa10.67□□□□□ -0.7
C9orf3-201ENST00000277198 GNG12Q9UBI6 72 aa10.67□□□□□ -0.7
C9orf3-201ENST00000277198 ABCA12Q86UK0 2595 aa10.67□□□□□ -0.7
C9orf3-201ENST00000277198 CSMD2Q7Z408 3487 aa10.67□□□□□ -0.7
C9orf3-201ENST00000277198 IGHV3-43A0A0B4J1X8 118 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 TSTD3H0UI37 97 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 FCGR3BO75015 233 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 PROP1O75360 226 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 IGHV3-43DP0DP04 118 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 VDAC2P45880 294 aaPredicted RBP10.66□□□□□ -0.7
C9orf3-201ENST00000277198 RAB7AP51149 207 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 PDZD11Q5EBL8 140 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 ACTL10Q5JWF8 245 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 PRAMEF5Q5TYX0 476 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 VKORC1Q9BQB6 163 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 TMEM204Q9BSN7 226 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 LRBAP50851 2863 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 PKDREJQ9NTG1 2253 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 IGHV1-18A0A0C4DH31 117 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 PRSS46E5RG02 174 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 FOXL1Q12952 345 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 LINC01551Q86U37 167 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 TPRX1Q8N7U7 411 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.66□□□□□ -0.7
C9orf3-201ENST00000277198 GATAD1Q8WUU5 269 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 S1PR3Q99500 378 aa10.66□□□□□ -0.7
C9orf3-201ENST00000277198 IGKV1D-17A0A075B6S4 117 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 DEFB108AA8MXU0 73 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 CXorf1O96002 111 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 STAG3L2P0CL84 134 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 STAG3L3P0CL85 134 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 LOXL3P58215 753 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 HNF4GQ14541 408 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 C3orf36Q3SXR2 165 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 TREML4Q6UXN2 200 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 SEM1Q6ZVN7 128 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 LINC00469Q8N7U9 141 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 DOCK7Q96N67 2140 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 PCGF1Q9BSM1 259 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 PROCRQ9UNN8 238 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 CACNA1DQ01668 2161 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 TACC2O95359 2948 aa10.65□□□□□ -0.7
C9orf3-201ENST00000277198 A0A1W2PPQ1 181 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 XKRY2A2RUG3 117 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 FNDC10F2Z333 226 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 M0R1X1 148 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 TNFSF13O75888 250 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 CGAP01215 116 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 GCGP01275 180 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 NPPCP23582 126 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 RELBQ01201 579 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 EDDM3AQ14507 147 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 BHLHA15Q7RTS1 189 aaPredicted RBP10.65□□□□□ -0.71
C9orf3-201ENST00000277198 NECAP1Q8NC96 275 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 OR4S2Q8NH73 311 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 DDB2Q92466 427 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 NPVFQ9HCQ7 196 aa10.65□□□□□ -0.71
C9orf3-201ENST00000277198 HEYLQ9NQ87 328 aaPredicted RBP10.65□□□□□ -0.71
C9orf3-201ENST00000277198 TRBV23-1A0A0A0MS06 115 aa10.64□□□□□ -0.71
C9orf3-201ENST00000277198 IGHV3-13P01766 116 aa10.64□□□□□ -0.71
C9orf3-201ENST00000277198 AMBPP02760 352 aa10.64□□□□□ -0.71
C9orf3-201ENST00000277198 PAX1P15863 534 aa10.64□□□□□ -0.71
C9orf3-201ENST00000277198 GNB1P62873 340 aa10.64□□□□□ -0.71
C9orf3-201ENST00000277198 GAMTQ14353 236 aa10.64□□□□□ -0.71
C9orf3-201ENST00000277198 C9orf152Q5JTZ5 239 aa10.64□□□□□ -0.71
C9orf3-201ENST00000277198 CDPF1Q6NVV7 123 aa10.64□□□□□ -0.71
C9orf3-201ENST00000277198 GCSAMQ8N6F7 178 aa10.64□□□□□ -0.71
C9orf3-201ENST00000277198 OR2Z1Q8NG97 314 aa10.64□□□□□ -0.71
C9orf3-201ENST00000277198 IFI27L2Q9H2X8 130 aa10.64□□□□□ -0.71
C9orf3-201ENST00000277198 LSM4Q9Y4Z0 139 aaKnown RBP10.64□□□□□ -0.71
C9orf3-201ENST00000277198 SLC25A15Q9Y619 301 aa10.64□□□□□ -0.71
C9orf3-201ENST00000277198 FAM90A27PA6NNH2 459 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 CCKARP32238 428 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 LINC00205P59089 165 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 TMEM30BQ3MIR4 351 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 SPINK9Q5DT21 86 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 TMEM144Q7Z5S9 345 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 STARD4Q96DR4 205 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 ADTRPQ96IZ2 230 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 DCTN5Q9BTE1 182 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 ELOVL1Q9BW60 279 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 GGTLC1Q9BX51 225 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms