RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 RTBDNQ9BSG5 229 aaPredicted RBP11.5□□□□□ -0.57
NPC1-201ENST00000269228 SEC11CQ9BY50 192 aa11.5□□□□□ -0.57
NPC1-201ENST00000269228 TP53BP1Q12888 1972 aaPredicted RBP11.5□□□□□ -0.57
NPC1-201ENST00000269228 HELZP42694 1942 aaKnown RBP11.5□□□□□ -0.57
NPC1-201ENST00000269228 TRBV6-7A0A0A0MS04 114 aa11.5□□□□□ -0.57
NPC1-201ENST00000269228 FAM209BQ5JX69 171 aa11.5□□□□□ -0.57
NPC1-201ENST00000269228 NCMAPQ5T1S8 102 aa11.5□□□□□ -0.57
NPC1-201ENST00000269228 EBLN2Q6P2I7 272 aa11.5□□□□□ -0.57
NPC1-201ENST00000269228 WDR73Q6P4I2 378 aa11.5□□□□□ -0.57
NPC1-201ENST00000269228 DHRS11Q6UWP2 260 aa11.5□□□□□ -0.57
NPC1-201ENST00000269228 PGPA6NDG6 321 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 TRGV3P03979 118 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 FAM74A3Q4VXF1 159 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 ZNF474Q6S9Z5 364 aaPredicted RBP11.49□□□□□ -0.57
NPC1-201ENST00000269228 GFI1Q99684 422 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 TMPRSS5Q9H3S3 457 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 CA7P43166 264 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 TMEM78Q5T7P6 136 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 MBNL2Q5VZF2 373 aaKnown RBP11.49□□□□□ -0.57
NPC1-201ENST00000269228 ZNF497Q6ZNH5 498 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 ZNF738Q8NE65 137 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 IGHV3OR16-13A0A075B7E8 117 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 IGHV3-74A0A0B4J1X5 117 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 H3BTX0 84 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 MOSP00540 346 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 HIST1H1BP16401 226 aaKnown RBP11.49□□□□□ -0.57
NPC1-201ENST00000269228 TUSC1Q2TAM9 212 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 PQLC2Q6ZP29 291 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 RAB24Q969Q5 203 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 EEF1AKMT3Q96AZ1 226 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 GALNT14Q96FL9 552 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 IGKV1D-13A0A0B4J2D9 117 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 IGKV1-13P0DP09 117 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 SELLP14151 372 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 PIP4P1Q86T03 277 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 FAM89BQ8N5H3 189 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 STPG3Q8N7X2 389 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 CYB561D1Q8N8Q1 229 aa11.49□□□□□ -0.57
NPC1-201ENST00000269228 SAA2-SAA4A0A096LPE2 208 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 C1QTNF9BB2RNN3 333 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 NDUFB4O95168 129 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 F12P00748 615 aaPredicted RBP11.48□□□□□ -0.57
NPC1-201ENST00000269228 C1QTNF9P0C862 333 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 SAA2P0DJI9 122 aaPredicted RBP11.48□□□□□ -0.57
NPC1-201ENST00000269228 RND3P61587 244 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 GBGT1Q8N5D6 347 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 PNRC2Q9NPJ4 139 aaKnown RBP11.48□□□□□ -0.57
NPC1-201ENST00000269228 J3QR89 54 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 IGHV3-23P01764 117 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 HLA-DRB5Q30154 266 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 DTX1Q86Y01 620 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 SH3BGRL3Q9H299 93 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 TMEM133Q9H2Q1 129 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 KIAA1671Q9BY89 1806 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 ACAA1P09110 424 aaPredicted RBP11.48□□□□□ -0.57
NPC1-201ENST00000269228 CD24P25063 80 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 COTL1Q14019 142 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 STPG2Q8N412 459 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 OR10J6PQ8NGY7 276 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 TECTAO75443 2155 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 LINC00862A6NCI5 91 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 ZNF273Q14593 569 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 TMEM56-RWDD3S4R434 201 aa11.48□□□□□ -0.57
NPC1-201ENST00000269228 A0A0A6YYD4 124 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 SRRM5B3KS81 715 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 RIGQ13278 110 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 OR2D3Q8NGH3 330 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 GTF3AQ92664 365 aaKnown RBP11.47□□□□□ -0.57
NPC1-201ENST00000269228 IGKV1-27A0A075B6S5 117 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 YPEL1O60688 119 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 IL4P05112 153 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 C8orf88P0DMB2 117 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 ZP1P60852 638 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 MORN2Q502X0 79 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 OR51G1Q8NGK1 321 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 YPEL2Q96QA6 119 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 B4DEV8 164 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 SIGLEC5O15389 551 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 HOXA4Q00056 320 aaPredicted RBP11.47□□□□□ -0.57
NPC1-201ENST00000269228 VAMP3Q15836 100 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 NABP2Q9BQ15 211 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 FAM208BQ5VWN6 2430 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 OR2T8A6NH00 312 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 NMBP08949 121 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 NPPCP23582 126 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 HIST3H3Q16695 136 aa11.47□□□□□ -0.57
NPC1-201ENST00000269228 MGPP08493 103 aa11.46□□□□□ -0.57
NPC1-201ENST00000269228 MEF2BQ02080 365 aaPredicted RBP11.46□□□□□ -0.57
NPC1-201ENST00000269228 LAMTOR1Q6IAA8 161 aa11.46□□□□□ -0.57
NPC1-201ENST00000269228 OR4B1Q8NGF8 309 aa11.46□□□□□ -0.57
NPC1-201ENST00000269228 NUP210Q8TEM1 1887 aaPredicted RBP11.46□□□□□ -0.57
NPC1-201ENST00000269228 CFDP00746 253 aaPredicted RBP11.46□□□□□ -0.57
NPC1-201ENST00000269228 DGAT2L7PQ6IED9 249 aa11.46□□□□□ -0.57
NPC1-201ENST00000269228 RPRMLQ8N4K4 120 aa11.46□□□□□ -0.57
NPC1-201ENST00000269228 SCN8AQ9UQD0 1980 aa11.46□□□□□ -0.57
NPC1-201ENST00000269228 KIAA2026Q5HYC2 2103 aa11.46□□□□□ -0.57
NPC1-201ENST00000269228 LILRA1O75019 489 aa11.46□□□□□ -0.58
NPC1-201ENST00000269228 TCF15Q12870 199 aa11.46□□□□□ -0.58
NPC1-201ENST00000269228 PPP1R27Q86WC6 154 aa11.46□□□□□ -0.58
NPC1-201ENST00000269228 NHLRC2Q8NBF2 726 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms