RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 GCHFRP30047 84 aa13.95□□□□□ -0.18
RTN1-201ENST00000267484 IER3P46695 156 aa13.95□□□□□ -0.18
RTN1-201ENST00000267484 ERVFC1-1P60608 527 aa13.95□□□□□ -0.18
RTN1-201ENST00000267484 EFNB3Q15768 340 aa13.95□□□□□ -0.18
RTN1-201ENST00000267484 KRTCAP3Q53RY4 240 aa13.95□□□□□ -0.18
RTN1-201ENST00000267484 INO80CQ6PI98 192 aaPredicted RBP13.95□□□□□ -0.18
RTN1-201ENST00000267484 STPG3Q8N7X2 389 aa13.95□□□□□ -0.18
RTN1-201ENST00000267484 CGAP01215 116 aa13.95□□□□□ -0.18
RTN1-201ENST00000267484 ERVK-16P61578 105 aa13.95□□□□□ -0.18
RTN1-201ENST00000267484 SRSF6Q13247 344 aaKnown RBP13.95□□□□□ -0.18
RTN1-201ENST00000267484 MSMPQ1L6U9 139 aa13.95□□□□□ -0.18
RTN1-201ENST00000267484 ZNF718Q3SXZ3 478 aa13.95□□□□□ -0.18
RTN1-201ENST00000267484 LBHQ53QV2 105 aaPredicted RBP13.95□□□□□ -0.18
RTN1-201ENST00000267484 Q6ZT83 130 aa13.95□□□□□ -0.18
RTN1-201ENST00000267484 PRR7Q8TB68 274 aa13.95□□□□□ -0.18
RTN1-201ENST00000267484 C1orf194Q5T5A4 169 aa13.94□□□□□ -0.18
RTN1-201ENST00000267484 MRPL18Q9H0U6 180 aaKnown RBP13.94□□□□□ -0.18
RTN1-201ENST00000267484 GATA2P23769 480 aaPredicted RBP13.94□□□□□ -0.18
RTN1-201ENST00000267484 TCTEX1D1Q8N7M0 179 aa13.94□□□□□ -0.18
RTN1-201ENST00000267484 S1PR3Q99500 378 aa13.94□□□□□ -0.18
RTN1-201ENST00000267484 ROS1P08922 2347 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 IGFBP2P18065 325 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 HSPB9Q9BQS6 159 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 IFI27L2Q9H2X8 130 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 A6NNC1 897 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 IGKV3-15P01624 115 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 ADH4P08319 380 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 DUX4L9Q6RFH8 374 aaPredicted RBP13.93□□□□□ -0.18
RTN1-201ENST00000267484 MIR17HGQ75NE6 70 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 C9orf106Q8NAJ2 232 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 OR1L6Q8NGR2 347 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 ZCCHC14Q8WYQ9 949 aaKnown RBP13.93□□□□□ -0.18
RTN1-201ENST00000267484 FER1L6-AS2Q96M78 137 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 IER2Q9BTL4 223 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 PAM16Q9Y3D7 125 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 HTD2P86397 168 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 C21orf62-AS1Q17RA5 79 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 FAM216AQ8WUB2 273 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 FAM103A1Q9BTL3 118 aaKnown RBP13.93□□□□□ -0.18
RTN1-201ENST00000267484 CLCF1Q9UBD9 225 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 RNF114Q9Y508 228 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 CEP250Q9BV73 2442 aa13.93□□□□□ -0.18
RTN1-201ENST00000267484 CRISP2P16562 243 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 OR10J1P30954 320 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 KIR2DL2P43627 348 aaPredicted RBP13.92□□□□□ -0.18
RTN1-201ENST00000267484 KIAA1644Q3SXP7 199 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 DBX2Q6ZNG2 339 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 FAM90A1Q86YD7 464 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 PCNX2A6NKB5 2137 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 FCN1O00602 326 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 TCL1AP56279 114 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 LOXL3P58215 753 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 FXYD3Q14802 87 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 DOLPP1Q86YN1 238 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 VN1R17PQ8TDU5 208 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 PLCE1Q9P212 2302 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 M0R143 59 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 MPDU1O75352 247 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 CA2P00918 260 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 YPEL3P61236 119 aaPredicted RBP13.92□□□□□ -0.18
RTN1-201ENST00000267484 RPP30P78346 268 aaKnown RBP13.92□□□□□ -0.18
RTN1-201ENST00000267484 OR8I2Q8N0Y5 310 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 NPVFQ9HCQ7 196 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 TMEM106BQ9NUM4 274 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 ZNRD1Q9P1U0 126 aa13.92□□□□□ -0.18
RTN1-201ENST00000267484 LSM4Q9Y4Z0 139 aaKnown RBP13.92□□□□□ -0.18
RTN1-201ENST00000267484 KIR2DL5BA0A0G2JN68 375 aa13.91□□□□□ -0.18
RTN1-201ENST00000267484 KIR2DL5BA0A0G2JPC4 375 aa13.91□□□□□ -0.18
RTN1-201ENST00000267484 VHLLQ6RSH7 139 aa13.91□□□□□ -0.18
RTN1-201ENST00000267484 BAGE3Q86Y29 109 aa13.91□□□□□ -0.18
RTN1-201ENST00000267484 BAGE2Q86Y30 109 aa13.91□□□□□ -0.18
RTN1-201ENST00000267484 KIR2DL5AQ8N109 375 aa13.91□□□□□ -0.18
RTN1-201ENST00000267484 YLPM1P49750 1951 aaKnown RBP13.91□□□□□ -0.18
RTN1-201ENST00000267484 SNURFLB1AK76 121 aa13.91□□□□□ -0.18
RTN1-201ENST00000267484 RNASE7Q9H1E1 156 aaKnown RBP13.91□□□□□ -0.18
RTN1-201ENST00000267484 OPN3Q9H1Y3 402 aaPredicted RBP13.91□□□□□ -0.18
RTN1-201ENST00000267484 PRO3102Q9H379 93 aa13.91□□□□□ -0.18
RTN1-201ENST00000267484 PARD6AQ9NPB6 346 aa13.91□□□□□ -0.18
RTN1-201ENST00000267484 IL36BQ9NZH7 164 aa13.91□□□□□ -0.18
RTN1-201ENST00000267484 CRYBB3P26998 211 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 MLANAQ16655 118 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 TMEM249Q2WGJ8 235 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 TEPPQ6URK8 271 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 IGHV2OR16-5A0A0B4J2B6 119 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 NPY1RP25929 384 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 CCL11P51671 97 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 ST6GALNAC3Q8NDV1 305 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 EAF1Q96JC9 268 aaPredicted RBP13.9□□□□□ -0.18
RTN1-201ENST00000267484 DSCAMO60469 2012 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 IGHV1-18A0A0C4DH31 117 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 CD59P13987 128 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 TDGF1P3P51864 188 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 PSG5Q15238 335 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 BATFQ16520 125 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 HES3Q5TGS1 186 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 OR4A47Q6IF82 309 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 MMD2Q8IY49 270 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 GCSAMQ8N6F7 178 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 SLC24A4Q8NFF2 622 aa13.9□□□□□ -0.18
RTN1-201ENST00000267484 LRFN3Q9BTN0 628 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms