RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 TSPOP30536 169 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 HMGA2P52926 109 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 GFI1BQ5VTD9 330 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 PPIAL4AQ9Y536 164 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 EFNB1P98172 346 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 SIRT4Q9Y6E7 314 aaPredicted RBP9.6□□□□□ -0.87
CHFR-201ENST00000266880 SERF1AO75920 110 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 RPL8P62917 257 aaKnown RBP9.6□□□□□ -0.87
CHFR-201ENST00000266880 VAX1Q5SQQ9 334 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 ATRAIDQ6UW56 229 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 TMEM91Q6ZNR0 172 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 RPP21Q9H633 154 aaKnown RBP9.6□□□□□ -0.87
CHFR-201ENST00000266880 ST6GALNAC2Q9UJ37 374 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 SLC25A15Q9Y619 301 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 PRSS23O95084 383 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 UCN2Q96RP3 112 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 TNFRSF18Q9Y5U5 241 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 MUC4Q99102 2169 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 hCG_38984A0A1B0GV85 526 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 SRD5A2P31213 254 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 LILRA5A6NI73 299 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 MOSP00540 346 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 NHLRC3Q5JS37 347 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 OR4X2Q8NGF9 303 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 HEXA-AS1Q9H8Q6 139 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 IGHV3-49A0A0A0MS15 119 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 TMEM229AB2RXF0 380 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 ACSF3Q4G176 576 aaPredicted RBP9.6□□□□□ -0.87
CHFR-201ENST00000266880 JMJD8Q96S16 334 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 CST9LQ9H4G1 147 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 GGTLC3B5MD39 225 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 LMO7DNF2Z398 122 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 C8orf88P0DMB2 117 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 LEAP2Q969E1 77 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 DIRC2Q96SL1 478 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 IGHV3-66A0A0C4DH42 116 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 A0A0G2JMM0 328 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 A0A1W2PPB8 328 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 KIR3DP1A8MWS1 328 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 IL36BQ9NZH7 164 aa9.6□□□□□ -0.87
CHFR-201ENST00000266880 A0A1W2PS18 150 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 TBX6O95947 436 aaPredicted RBP9.59□□□□□ -0.87
CHFR-201ENST00000266880 C17orf99Q6UX52 265 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 ARRDC1-AS1Q9H2J1 176 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 CCL13Q99616 98 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 OR51G1Q8NGK1 321 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 TMEM30AQ9NV96 361 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 IGHV3OR16-13A0A075B7E8 117 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 IGHV3-74A0A0B4J1X5 117 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 GAGE12BA1L429 117 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 SCO2A0A1W2PP80 73 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 TIMM23BQ5SRD1 257 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 ATG4DQ86TL0 474 aaPredicted RBP9.59□□□□□ -0.87
CHFR-201ENST00000266880 KIR3DL3Q8N743 410 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 TMEM174Q8WUU8 243 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 ALS2Q96Q42 1657 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 TDGF1P13385 188 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 H2BFSP57053 126 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 C2orf68Q2NKX9 166 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 UNQ5815/PRO19632Q6UWF5 114 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 MRPL20Q9BYC9 149 aaKnown RBP9.59□□□□□ -0.87
CHFR-201ENST00000266880 TRAV9-2A0A087WT02 112 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 SSBP2P81877 361 aaPredicted RBP9.59□□□□□ -0.87
CHFR-201ENST00000266880 WDR82Q6UXN9 313 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 MALRD1Q5VYJ5 2156 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 NANOS3P60323 173 aaKnown RBP9.59□□□□□ -0.87
CHFR-201ENST00000266880 UNC119Q13432 240 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 WDYHV1Q96HA8 205 aa9.59□□□□□ -0.87
CHFR-201ENST00000266880 GREB1Q4ZG55 1949 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 IGHV5-51A0A0C4DH38 117 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 LSM6P62312 80 aaKnown RBP9.58□□□□□ -0.88
CHFR-201ENST00000266880 ATP5G2Q06055 141 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 LOC105371242A0A075B767 164 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 PPIAL4CA0A0B4J2A2 164 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 PPIAL4GP0DN37 164 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 NPIPB4C9JG80 1138 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 NPC2P61916 151 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 ATXN8Q156A1 80 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 PRDM13Q9H4Q3 707 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 PMS2CLQ68D20 193 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 C5orf66Q9H5L9 145 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 HRKO00198 91 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 AZU1P20160 251 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 GUSBP11Q6P575 273 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 ZNF71Q9NQZ8 489 aaPredicted RBP9.58□□□□□ -0.88
CHFR-201ENST00000266880 PGLYRP1O75594 196 aaPredicted RBP9.58□□□□□ -0.88
CHFR-201ENST00000266880 FAM89BQ8N5H3 189 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 IGLV3-27P01718 113 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 FOXC1Q12948 553 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 LINC00615Q96LM1 132 aaPredicted RBP9.58□□□□□ -0.88
CHFR-201ENST00000266880 NRTNQ99748 197 aa9.58□□□□□ -0.88
CHFR-201ENST00000266880 IGHV3-23P01764 117 aa9.57□□□□□ -0.88
CHFR-201ENST00000266880 GAGE1Q13065 139 aa9.57□□□□□ -0.88
CHFR-201ENST00000266880 OR10J3Q5JRS4 329 aa9.57□□□□□ -0.88
CHFR-201ENST00000266880 ZNF114Q8NC26 417 aa9.57□□□□□ -0.88
CHFR-201ENST00000266880 IGHV3-35A0A0C4DH35 117 aa9.57□□□□□ -0.88
CHFR-201ENST00000266880 NXT2Q9NPJ8 142 aaKnown RBP9.57□□□□□ -0.88
CHFR-201ENST00000266880 MBNL3Q9NUK0 354 aaKnown RBP9.57□□□□□ -0.88
CHFR-201ENST00000266880 EPDR1Q9UM22 224 aa9.57□□□□□ -0.88
CHFR-201ENST00000266880 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms