RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 A0A0G2JNJ9 132 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 ITGB1BP1O14713 200 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 MMP23AO75900 390 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 YIF1AO95070 293 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 IRF2P14316 349 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 THBS3P49746 956 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 RND2P52198 227 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 TMEM241Q24JQ0 296 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 C16orf82Q7Z2V1 217 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 ZNF383Q8NA42 475 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 TMEM170AQ8WVE7 144 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 MS4A5Q9H3V2 200 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 NCOR1P1Q9H4R4 102 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 Q9UFV3 132 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 CRYBG3Q68DQ2 2970 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 C15orf61A6NNL5 157 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 TRGC2P03986 189 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 MYOD1P15172 320 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 CCL8P80075 99 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 OR4A47Q6IF82 309 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 ZNF788Q6ZQV5 615 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 NECAP1Q8NC96 275 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 ZNF439Q8NDP4 499 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 DIRC2Q96SL1 478 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 ZNF251Q9BRH9 671 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 PATZ1Q9HBE1 687 aaKnown RBP10.6□□□□□ -0.71
CPSF6-201ENST00000266679 ZNRD1Q9P1U0 126 aa10.6□□□□□ -0.71
CPSF6-201ENST00000266679 PRSS46E5RG02 174 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 TMEM250H0YL14 139 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 LY86O95711 162 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 UBE2G2P60604 165 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 RPL23P62829 140 aaKnown RBP10.59□□□□□ -0.71
CPSF6-201ENST00000266679 SRSF1Q07955 248 aaKnown RBP eCLIP10.59□□□□□ -0.711e-6■■■■□ 21.4
CPSF6-201ENST00000266679 TREML4Q6UXN2 200 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 DOLPP1Q86YN1 238 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.59□□□□□ -0.71
CPSF6-201ENST00000266679 NUP37Q8NFH4 326 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 NEIL1Q96FI4 390 aaPredicted RBP10.59□□□□□ -0.71
CPSF6-201ENST00000266679 RHOVQ96L33 236 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 MGST2Q99735 147 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 TCEAL7Q9BRU2 100 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 CTDSP1Q9GZU7 261 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 TMEM242Q9NWH2 141 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 GAB2Q9UQC2 676 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 PLCE1Q9P212 2302 aa10.59□□□□□ -0.71
CPSF6-201ENST00000266679 ZNF729A6NN14 1252 aaPredicted RBP10.58□□□□□ -0.72
CPSF6-201ENST00000266679 SEC14L6B5MCN3 397 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 PRRG2O14669 202 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 NDUFB7P17568 137 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 BSXQ3C1V8 233 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 PDLIM3Q53GG5 364 aaPredicted RBP10.58□□□□□ -0.72
CPSF6-201ENST00000266679 MIC13Q5XKP0 118 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 TMEM108Q6UXF1 575 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 SPNS3Q6ZMD2 512 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 ZCCHC24Q8N2G6 241 aaKnown RBP10.58□□□□□ -0.72
CPSF6-201ENST00000266679 CISD2Q8N5K1 135 aaKnown RBP10.58□□□□□ -0.72
CPSF6-201ENST00000266679 GGTLC1Q9BX51 225 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 HINT2Q9BX68 163 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 DOK5Q9P104 306 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 TRGV8A0A0C4DH27 118 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 A0A1W2PPV4 95 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 NKX6-3A6NJ46 265 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 C11orf94C9JXX5 98 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 C16orf97H3BN30 126 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 HIST1H2BKO60814 126 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 OPN1MWP04001 364 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 HIST1H2BJP06899 126 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 OPN1MW2P0DN77 364 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 OPN1MW3P0DN78 364 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 HIST1H2BOP23527 126 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 HIST1H2BBP33778 126 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 HIST1H2BDP58876 126 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 HIST1H2BCP62807 126 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 HIST2H2BEQ16778 126 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.58□□□□□ -0.72
CPSF6-201ENST00000266679 HIST1H2BHQ93079 126 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 HIST1H2BNQ99877 126 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 HIST1H2BMQ99879 126 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 ENY2Q9NPA8 101 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 FOXA2Q9Y261 457 aaPredicted RBP10.58□□□□□ -0.72
CPSF6-201ENST00000266679 PXMP4Q9Y6I8 212 aa10.58□□□□□ -0.72
CPSF6-201ENST00000266679 TMPRSS2O15393 492 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 MPDU1O75352 247 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 HOXA5P20719 270 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 OPRK1P41145 380 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 ATP5G3P48201 142 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 TDGF1P3P51864 188 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 Q8NA96 180 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 SSMEM1Q8WWF3 244 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 ADTRPQ96IZ2 230 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 GGACTQ9BVM4 153 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 DPRXA6NFQ7 191 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 OR4A8P0C604 315 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 GNLYP22749 145 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 NPY1RP25929 384 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 ADIPOQQ15848 244 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 C4orf17Q53FE4 359 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 TEX36Q5VZQ5 186 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 CST9LP1Q5W188 147 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 SLC24A4Q8NFF2 622 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms