RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 VAMP1P23763 118 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 PPIFP30405 207 aaKnown RBP11.23□□□□□ -0.61
SSBP1-201ENST00000265304 FXYD3Q14802 87 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 RGS21Q2M5E4 152 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 TRIM16LQ309B1 348 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 TMEM268Q5VZI3 342 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 Q6ZRM9 215 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 H2BFWTQ7Z2G1 175 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 ZNF695Q8IW36 515 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 SLC35G3Q8N808 338 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 RNF152Q8N8N0 203 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 MINDY2Q8NBR6 621 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 DMBX1Q8NFW5 382 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 CHPT1Q8WUD6 406 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 C19orf24Q9BVV8 132 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 PRNDQ9UKY0 176 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 FOXA2Q9Y261 457 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-201ENST00000265304 FBXO7Q9Y3I1 522 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 TMED3Q9Y3Q3 217 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 WNK1Q9H4A3 2382 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 A0A1B0GW64 132 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 CGB1A6NKQ9 187 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 PITX3O75364 302 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 OR2B8PP59922 312 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 PLGLAQ15195 96 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 C4orf46Q504U0 113 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 THOC7Q6I9Y2 204 aaKnown RBP11.22□□□□□ -0.61
SSBP1-201ENST00000265304 SSX9Q7RTT3 188 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 LYZL2Q7Z4W2 148 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 OR5B3Q8NH48 314 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 OR52E5Q8NH55 327 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 ARPC1AQ92747 370 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 RRNAD1Q96FB5 475 aaKnown RBP11.22□□□□□ -0.61
SSBP1-201ENST00000265304 GON7Q9BXV9 100 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 NDUFA4L2Q9NRX3 87 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 CACFD1Q9UGQ2 172 aa11.22□□□□□ -0.61
SSBP1-201ENST00000265304 TEX50A0A1B0GTY4 177 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 A0A1B0GU03 582 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 TEX22C9J3V5 150 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 E7EUB6 86 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 ATP6V0E1O15342 81 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 SNAPC5O75971 98 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 DHFRP00374 187 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 MDKP21741 143 aaPredicted RBP11.21□□□□□ -0.61
SSBP1-201ENST00000265304 VDAC2P45880 294 aaPredicted RBP11.21□□□□□ -0.61
SSBP1-201ENST00000265304 RAB25P57735 213 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 ASPHD1Q5U4P2 390 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 STPG2Q8N412 459 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 COQ8AQ8NI60 647 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 SRSF12Q8WXF0 261 aaKnown RBP11.21□□□□□ -0.61
SSBP1-201ENST00000265304 TAF15Q92804 592 aaKnown RBP eCLIP11.21□□□□□ -0.61
SSBP1-201ENST00000265304 GPR146Q96CH1 333 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 SPIN2AQ99865 258 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 SPIN2BQ9BPZ2 258 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 RNF114Q9Y508 228 aa11.21□□□□□ -0.61
SSBP1-201ENST00000265304 IGLV1-40P01703 118 aa11.2□□□□□ -0.62
SSBP1-201ENST00000265304 IGHG4P01861 327 aa11.2□□□□□ -0.62
SSBP1-201ENST00000265304 AKR1C2P52895 323 aa11.2□□□□□ -0.62
SSBP1-201ENST00000265304 HSPE1P61604 102 aaKnown RBP11.2□□□□□ -0.62
SSBP1-201ENST00000265304 TMEM267Q0VDI3 215 aaPredicted RBP11.2□□□□□ -0.62
SSBP1-201ENST00000265304 AWAT1Q58HT5 328 aa11.2□□□□□ -0.62
SSBP1-201ENST00000265304 HSD17B13Q7Z5P4 300 aaPredicted RBP11.2□□□□□ -0.62
SSBP1-201ENST00000265304 COMMD1Q8N668 190 aa11.2□□□□□ -0.62
SSBP1-201ENST00000265304 OR52B4Q8NGK2 314 aa11.2□□□□□ -0.62
SSBP1-201ENST00000265304 OR1L8Q8NGR8 309 aa11.2□□□□□ -0.62
SSBP1-201ENST00000265304 PHB2Q99623 299 aa11.2□□□□□ -0.62
SSBP1-201ENST00000265304 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.2□□□□□ -0.62
SSBP1-201ENST00000265304 PRR13Q9NZ81 148 aa11.2□□□□□ -0.62
SSBP1-201ENST00000265304 MSGN1A6NI15 193 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 ACTL6BO94805 426 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 CNIH1O95406 144 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 CRYGCP07315 174 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 RPL27AP46776 148 aaKnown RBP11.19□□□□□ -0.62
SSBP1-201ENST00000265304 TNXAQ16473 311 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 IZUMO4Q1ZYL8 232 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 TMEM95Q3KNT9 176 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 C9orf152Q5JTZ5 239 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 C12orf45Q8N5I9 185 aaPredicted RBP11.19□□□□□ -0.62
SSBP1-201ENST00000265304 TTC9CQ8N5M4 171 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 CASTOR1Q8WTX7 329 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 WFDC12Q8WWY7 111 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 CLCC1Q96S66 551 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 SEC22CQ9BRL7 303 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 QTRT1Q9BXR0 403 aaKnown RBP11.19□□□□□ -0.62
SSBP1-201ENST00000265304 COMMD5Q9GZQ3 224 aa11.19□□□□□ -0.62
SSBP1-201ENST00000265304 GPN1Q9HCN4 374 aaPredicted RBP11.19□□□□□ -0.62
SSBP1-201ENST00000265304 TRAV41A0A0B4J266 112 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 IGLC7A0M8Q6 106 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 FAM90A26D6RGX4 464 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 SULT1A3P0DMM9 295 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 SULT1A4P0DMN0 295 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 PRCDQ00LT1 54 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 IL15RAQ13261 267 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 SMCO1Q147U7 214 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 C10orf55Q5SWW7 151 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 GGNBP1Q5YKI7 109 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 LFNGQ8NES3 379 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 OR4A16Q8NH70 328 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 MYOZ3Q8TDC0 251 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 NOL4LQ96MY1 436 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms