RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 EAF1Q96JC9 268 aaPredicted RBP10.95□□□□□ -0.66
NUP54-201ENST00000264883 MTCH1Q9NZJ7 389 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 OR1A1Q9P1Q5 309 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 TP73-AS1Q9UF72 201 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 MUC21A0A0G2JKD1 596 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 MUC21A0A140T8X8 626 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.94□□□□□ -0.66
NUP54-201ENST00000264883 CXCL13O43927 109 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 AMY1AP04745 511 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 LINC00869P0C866 280 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 ACP1P24666 158 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 HOXC12P31275 282 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 NTF4P34130 210 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 GPM6AP51674 278 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 UBE2G1P62253 170 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 SLC35B1P78383 322 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 TBR1Q16650 682 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 MUC21Q5SSG8 566 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 EBLN2Q6P2I7 272 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 FGFBP3Q8TAT2 258 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 HES4Q9HCC6 221 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 LY96Q9Y6Y9 160 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 R4GN57 208 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 C9JCJ5 164 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 J3QR06 171 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 HLA-DQA1P01909 254 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 CELA2AP08217 269 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 MRPL49Q13405 166 aaKnown RBP10.94□□□□□ -0.66
NUP54-201ENST00000264883 Q8N7P7 452 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 OR8B3Q8NGG8 313 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 OR10D3Q8NH80 312 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 SARAFQ96BY9 339 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 OR8B2Q96RD0 313 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 PKIBQ9C010 78 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 OCIAD1Q9NX40 245 aa10.94□□□□□ -0.66
NUP54-201ENST00000264883 YTHDF2Q9Y5A9 579 aaKnown RBP10.94□□□□□ -0.66
NUP54-201ENST00000264883 M0R2Z0 102 aa10.93□□□□□ -0.66
NUP54-201ENST00000264883 ZG16O60844 167 aa10.93□□□□□ -0.66
NUP54-201ENST00000264883 HSBP1O75506 76 aa10.93□□□□□ -0.66
NUP54-201ENST00000264883 CXorf1O96002 111 aa10.93□□□□□ -0.66
NUP54-201ENST00000264883 APCSP02743 223 aa10.93□□□□□ -0.66
NUP54-201ENST00000264883 CELA3BP08861 270 aa10.93□□□□□ -0.66
NUP54-201ENST00000264883 OTX2P32243 289 aa10.93□□□□□ -0.66
NUP54-201ENST00000264883 IGFBP7Q16270 282 aa10.93□□□□□ -0.66
NUP54-201ENST00000264883 OR2D2Q9H210 308 aa10.93□□□□□ -0.66
NUP54-201ENST00000264883 MPC1Q9Y5U8 109 aa10.93□□□□□ -0.66
NUP54-201ENST00000264883 TNRC6AQ8NDV7 1962 aaKnown RBP10.93□□□□□ -0.66
NUP54-201ENST00000264883 SS18L1O75177 396 aaPredicted RBP10.92□□□□□ -0.66
NUP54-201ENST00000264883 CD46P15529 392 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 PAX2Q02962 417 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 TNXAQ16473 311 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 ZNF718Q3SXZ3 478 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 MRPL54Q6P161 138 aaKnown RBP10.92□□□□□ -0.66
NUP54-201ENST00000264883 C12orf54Q6X4T0 127 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 C18orf32Q8TCD1 76 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 IGKV3D-15A0A087WSY6 115 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 TRGV10A0A0A0MS01 117 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 LRRC30A6NM36 301 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 G3V3Y1 287 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 OR7C2O60412 319 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 STAG3L2P0CL84 134 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 STAG3L3P0CL85 134 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 TCL1AP56279 114 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 VWA1Q6PCB0 445 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 FER1L6-AS1Q8NA97 138 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 OR4S2Q8NH73 311 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 NINJ1Q92982 152 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 ZDHHC16Q969W1 377 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 FGF23Q9GZV9 251 aaPredicted RBP10.92□□□□□ -0.66
NUP54-201ENST00000264883 ST20Q9HBF5 79 aa10.92□□□□□ -0.66
NUP54-201ENST00000264883 TRAV8-6A0A0B4J262 113 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 G3V4G9 280 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 CDX4O14627 284 aaPredicted RBP10.91□□□□□ -0.66
NUP54-201ENST00000264883 RRHO14718 337 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 CD5LO43866 347 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 IGLC1P0CG04 106 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 CA7P43166 264 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 YRDCQ86U90 279 aaKnown RBP10.91□□□□□ -0.66
NUP54-201ENST00000264883 ZBTB34Q8NCN2 500 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 OR2Y1Q8NGV0 311 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.91□□□□□ -0.66
NUP54-201ENST00000264883 PEF1Q9UBV8 284 aaKnown RBP10.91□□□□□ -0.66
NUP54-201ENST00000264883 WDR83OSQ9Y284 106 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 EML6Q6ZMW3 1958 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 NPY1RP25929 384 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 SSTR5P35346 364 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 G6PCP35575 357 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 GNG3P63215 75 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 CLUHP3Q96NS8 147 aa10.91□□□□□ -0.66
NUP54-201ENST00000264883 C2orf70A6NJV1 201 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 ANKRD30BLA7E2S9 258 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 MRPL33O75394 65 aaKnown RBP10.9□□□□□ -0.66
NUP54-201ENST00000264883 KLF7O75840 302 aaPredicted RBP10.9□□□□□ -0.66
NUP54-201ENST00000264883 OR10J4P0C629 311 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 CD59P13987 128 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 CD1BP29016 333 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 TCF15Q12870 199 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 FXYD3Q14802 87 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 TCF24Q7RTU0 167 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 SPATA12Q7Z6I5 190 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms