RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 OR5A1Q8NGJ0 315 aa14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 ZCCHC14Q8WYQ9 949 aaKnown RBP14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 CEP192Q8TEP8 1941 aa14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 NPFFO15130 113 aa14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 LINC00469Q8N7U9 141 aa14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 SFXN3Q9BWM7 321 aa14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 WNT2BQ93097 391 aa14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 DLL3Q9NYJ7 618 aa14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 ZNF56Q15929 161 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 MARVELD3Q96A59 401 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 H3BRM9 83 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 ARF6P62330 175 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 HBBP68871 147 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 TFF2Q03403 129 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 EIF4EBP2Q13542 120 aaPredicted RBP14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 FAM106AQ4KMX7 169 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 TPRX1Q8N7U7 411 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 RAX2Q96IS3 184 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 FOXJ2Q9P0K8 574 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 PF4V1P10720 104 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 IL9P15248 144 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 hCG_38984A0A1B0GV85 526 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 H7C1H1 209 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 MBNL2Q5VZF2 373 aaKnown RBP14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 DNM1P46Q6ZS02 220 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 NIT1Q86X76 327 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 OR11H12B2RN74 326 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 CD8AP01732 235 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 GFRA1P56159 465 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 OR11H1Q8NG94 326 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 OR11H2Q8NH07 326 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 PIMREGQ9BSJ6 248 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 PILRAQ9UKJ1 303 aa14.97□□□□□ -0.01
NOTCH3-201ENST00000263388 VENTXO95231 258 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 RND3P61587 244 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 KIAA1549Q9HCM3 1950 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 DENND4CQ5VZ89 1909 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 WNK1Q9H4A3 2382 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 OR13C6PQ8NH95 151 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 SRSF12Q8WXF0 261 aaKnown RBP14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 LOC390937A0A1W2PQ73 354 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 H0YL77 283 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 TNRC6AQ8NDV7 1962 aaKnown RBP14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 SLC25A20O43772 301 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 GGACTQ9BVM4 153 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 IGLV1-36A0A0B4J1U3 117 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 ZNF815PA8K554 130 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 UNQ9370/PRO34162Q6UXP9 181 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 JPT1Q9UK76 154 aa14.96□□□□□ -0.01
NOTCH3-201ENST00000263388 GPX1P07203 203 aa14.96□□□□□ -0.02
NOTCH3-201ENST00000263388 GPR146Q96CH1 333 aa14.96□□□□□ -0.02
NOTCH3-201ENST00000263388 A0A1W2PP11 408 aa14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 RBMY1BA6NDE4 496 aaKnown RBP14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 RBMY1EA6NEQ0 496 aaKnown RBP14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 PLAUP00749 431 aa14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 RBMY1DP0C7P1 496 aaKnown RBP14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 RBMY1A1P0DJD3 496 aaKnown RBP14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 RBMY1CP0DJD4 496 aa14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 COX5BP10606 129 aa14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 CTSSP25774 331 aa14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 GPX4P36969 197 aaPredicted RBP14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 TMPRSS3P57727 454 aa14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 ITLN1Q8WWA0 313 aa14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 DPRXA6NFQ7 191 aa14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 EIF3GO75821 320 aaKnown RBP eCLIP14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 MDKP21741 143 aaPredicted RBP14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 PMS2CLQ68D20 193 aa14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 TNS1Q9HBL0 1735 aaKnown RBP14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 CA7P43166 264 aa14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 APCDD1LQ8NCL9 501 aa14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 FGF11Q92914 225 aa14.95□□□□□ -0.02
NOTCH3-201ENST00000263388 ATP5G2Q06055 141 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 CENPWQ5EE01 88 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 PLSCR2Q9NRY7 297 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 FUT5Q11128 374 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 FXYD3Q14802 87 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 KLF14Q8TD94 323 aaPredicted RBP14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 TMEM186Q96B77 213 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 SLC25A38Q96DW6 304 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 CA1P00915 261 aaPredicted RBP14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 RND2P52198 227 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 LINC00470Q9BZP3 86 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 CRYBB3P26998 211 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 SAPCD1Q5SSQ6 148 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 EEF1AKMT3Q96AZ1 226 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 CBLN4Q9NTU7 201 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 TMEM160Q9NX00 188 aa14.94□□□□□ -0.02
NOTCH3-201ENST00000263388 CLDND2Q8NHS1 167 aa14.93□□□□□ -0.02
NOTCH3-201ENST00000263388 DNASE2BQ8WZ79 361 aa14.93□□□□□ -0.02
NOTCH3-201ENST00000263388 HIST1H2BAQ96A08 127 aa14.93□□□□□ -0.02
NOTCH3-201ENST00000263388 NPIPB9F8W1W9 429 aa14.93□□□□□ -0.02
NOTCH3-201ENST00000263388 NPIPB7O75200 414 aa14.93□□□□□ -0.02
NOTCH3-201ENST00000263388 CLEC7AQ9BXN2 247 aa14.93□□□□□ -0.02
NOTCH3-201ENST00000263388 TMEM229AB2RXF0 380 aa14.93□□□□□ -0.02
NOTCH3-201ENST00000263388 PCSK4Q6UW60 755 aa14.93□□□□□ -0.02
NOTCH3-201ENST00000263388 UNQ5815/PRO19632Q6UWF5 114 aa14.93□□□□□ -0.02
NOTCH3-201ENST00000263388 OPN3Q9H1Y3 402 aaPredicted RBP14.93□□□□□ -0.02
NOTCH3-201ENST00000263388 MED13Q9UHV7 2174 aa14.93□□□□□ -0.02
NOTCH3-201ENST00000263388 MPTX1A8MV57 137 aa14.93□□□□□ -0.02
NOTCH3-201ENST00000263388 ATP5LO75964 103 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms