RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 STX12Q86Y82 276 aa18.38■□□□□ 0.53
SMARCB1-201ENST00000263121 PIP4P2Q8N4L2 257 aa18.38■□□□□ 0.53
SMARCB1-201ENST00000263121 Q96MF0 132 aa18.38■□□□□ 0.53
SMARCB1-201ENST00000263121 OR4C12Q96R67 309 aa18.38■□□□□ 0.53
SMARCB1-201ENST00000263121 TPT1P13693 172 aaKnown RBP18.37■□□□□ 0.53
SMARCB1-201ENST00000263121 MRGPRG-AS1Q2M3A8 158 aa18.37■□□□□ 0.53
SMARCB1-201ENST00000263121 OR5B3Q8NH48 314 aa18.37■□□□□ 0.53
SMARCB1-201ENST00000263121 C7orf69Q9H7B7 122 aa18.37■□□□□ 0.53
SMARCB1-201ENST00000263121 TPSG1Q9NRR2 321 aa18.37■□□□□ 0.53
SMARCB1-201ENST00000263121 PAIP2BQ9ULR5 123 aaKnown RBP18.37■□□□□ 0.53
SMARCB1-201ENST00000263121 GCN1Q92616 2671 aaKnown RBP18.36■□□□□ 0.53
SMARCB1-201ENST00000263121 IGHV1-69DA0A0B4J2H0 117 aa18.36■□□□□ 0.53
SMARCB1-201ENST00000263121 TEX50A0A1B0GTY4 177 aa18.36■□□□□ 0.53
SMARCB1-201ENST00000263121 IGHV1-69P01742 117 aa18.36■□□□□ 0.53
SMARCB1-201ENST00000263121 DYNLT3P51808 116 aa18.36■□□□□ 0.53
SMARCB1-201ENST00000263121 STPG2Q8N412 459 aa18.36■□□□□ 0.53
SMARCB1-201ENST00000263121 ZNF430Q9H8G1 570 aaPredicted RBP18.36■□□□□ 0.53
SMARCB1-201ENST00000263121 UBQLN2Q9UHD9 624 aa18.36■□□□□ 0.53
SMARCB1-201ENST00000263121 NAV2Q8IVL1 2488 aa18.36■□□□□ 0.53
SMARCB1-201ENST00000263121 JTBO76095 146 aa18.35■□□□□ 0.53
SMARCB1-201ENST00000263121 IGKV1D-33P01593 117 aa18.35■□□□□ 0.53
SMARCB1-201ENST00000263121 IGKV1-33P01594 117 aa18.35■□□□□ 0.53
SMARCB1-201ENST00000263121 METTL15P1P0C7V9 234 aa18.35■□□□□ 0.53
SMARCB1-201ENST00000263121 PRCDQ00LT1 54 aa18.35■□□□□ 0.53
SMARCB1-201ENST00000263121 ALKAL2Q6UX46 152 aa18.35■□□□□ 0.53
SMARCB1-201ENST00000263121 HAPLN4Q86UW8 402 aa18.35■□□□□ 0.53
SMARCB1-201ENST00000263121 THNSL2Q86YJ6 484 aa18.35■□□□□ 0.53
SMARCB1-201ENST00000263121 BAP18Q8IXM2 172 aa18.35■□□□□ 0.53
SMARCB1-201ENST00000263121 MAPK1IP1LQ8NDC0 245 aa18.35■□□□□ 0.53
SMARCB1-201ENST00000263121 OR5C1Q8NGR4 320 aa18.35■□□□□ 0.53
SMARCB1-201ENST00000263121 PHYHIPLQ96FC7 376 aa18.35■□□□□ 0.53
SMARCB1-201ENST00000263121 STRAPQ9Y3F4 350 aaKnown RBP18.35■□□□□ 0.53
SMARCB1-201ENST00000263121 TRAV40A0A0B4J280 105 aa18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 MOSP00540 346 aa18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 HOXA1P49639 335 aaPredicted RBP18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 EBI3Q14213 229 aa18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 TMEM217Q8N7C4 229 aa18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 UBAC2Q8NBM4 344 aa18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 EAF1Q96JC9 268 aaPredicted RBP18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 CLCC1Q96S66 551 aa18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 HIPK2Q9H2X6 1198 aa18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 SIGLEC9Q9Y336 463 aa18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 SNRNP70P08621 437 aaKnown RBP18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 EIF5AP63241 154 aaKnown RBP18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 ARL16Q0P5N6 197 aa18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 OR1S2Q8NGQ3 325 aa18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 SCARB1Q8WTV0 552 aa18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 COMMD5Q9GZQ3 224 aa18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 HEYLQ9NQ87 328 aaPredicted RBP18.34■□□□□ 0.53
SMARCB1-201ENST00000263121 CR1P17927 2039 aa18.33■□□□□ 0.53
SMARCB1-201ENST00000263121 C15orf62A8K5M9 175 aa18.33■□□□□ 0.52
SMARCB1-201ENST00000263121 PMS2P5A8MQ11 134 aa18.33■□□□□ 0.52
SMARCB1-201ENST00000263121 IGHV4-31P0DP07 118 aa18.33■□□□□ 0.52
SMARCB1-201ENST00000263121 CLINT1Q14677 625 aa18.33■□□□□ 0.52
SMARCB1-201ENST00000263121 PRSS8Q16651 343 aa18.33■□□□□ 0.52
SMARCB1-201ENST00000263121 FBLN7Q53RD9 439 aa18.33■□□□□ 0.52
SMARCB1-201ENST00000263121 RUSC1-AS1Q66K80 236 aa18.33■□□□□ 0.52
SMARCB1-201ENST00000263121 OR1L8Q8NGR8 309 aa18.33■□□□□ 0.52
SMARCB1-201ENST00000263121 OR2T10Q8NGZ9 312 aa18.33■□□□□ 0.52
SMARCB1-201ENST00000263121 ARV1Q9H2C2 271 aa18.33■□□□□ 0.52
SMARCB1-201ENST00000263121 NDUFA4L2Q9NRX3 87 aa18.33■□□□□ 0.52
SMARCB1-201ENST00000263121 METTL1Q9UBP6 276 aaKnown RBP18.33■□□□□ 0.52
SMARCB1-201ENST00000263121 ITGB1BP2Q9UKP3 347 aa18.33■□□□□ 0.52
SMARCB1-201ENST00000263121 BORCS7-ASMTA0A0B4J1R7 106 aa18.32■□□□□ 0.52
SMARCB1-201ENST00000263121 OPN1MWP04001 364 aa18.32■□□□□ 0.52
SMARCB1-201ENST00000263121 OPN1MW2P0DN77 364 aa18.32■□□□□ 0.52
SMARCB1-201ENST00000263121 OPN1MW3P0DN78 364 aa18.32■□□□□ 0.52
SMARCB1-201ENST00000263121 CD24P25063 80 aa18.32■□□□□ 0.52
SMARCB1-201ENST00000263121 PJVKQ0ZLH3 352 aa18.32■□□□□ 0.52
SMARCB1-201ENST00000263121 TMEM249Q2WGJ8 235 aa18.32■□□□□ 0.52
SMARCB1-201ENST00000263121 MMD2Q8IY49 270 aa18.32■□□□□ 0.52
SMARCB1-201ENST00000263121 Q8N6K4 173 aa18.32■□□□□ 0.52
SMARCB1-201ENST00000263121 NPBQ8NG41 125 aa18.32■□□□□ 0.52
SMARCB1-201ENST00000263121 PLEKHA3Q9HB20 300 aa18.32■□□□□ 0.52
SMARCB1-201ENST00000263121 IGHV3OR16-10A0A075B7F0 116 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 J3QLI3 93 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 RRHO14718 337 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 NDUFA3O95167 84 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 AVPP01185 164 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 IGHV4-38-2P0DP08 117 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 F2RL1P55085 397 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 HINT2Q9BX68 163 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 ENY2Q9NPA8 101 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 CGB1A6NKQ9 187 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 NBR2O15453 112 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 HBG1P69891 147 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 HBG2P69892 147 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 RPP30P78346 268 aaKnown RBP18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 HNF4GQ14541 408 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 ZNF266Q14584 549 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 MMDQ15546 238 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 PPP1R27Q86WC6 154 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 ATP5SQ99766 215 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 FBXL15Q9H469 300 aa18.31■□□□□ 0.52
SMARCB1-201ENST00000263121 E7EUB6 86 aa18.3■□□□□ 0.52
SMARCB1-201ENST00000263121 INS-IGF2F8WCM5 200 aa18.3■□□□□ 0.52
SMARCB1-201ENST00000263121 TGFAP01135 160 aa18.3■□□□□ 0.52
SMARCB1-201ENST00000263121 MAS1LP35410 378 aa18.3■□□□□ 0.52
SMARCB1-201ENST00000263121 HES1Q14469 280 aa18.3■□□□□ 0.52
SMARCB1-201ENST00000263121 TNCP24821 2201 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms