RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 NKX2-1P43699 371 aaPredicted RBP10.65□□□□□ -0.7
SGCA-201ENST00000262018 NCR3LG1Q68D85 454 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 COMMD7Q86VX2 200 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 FOXRED2Q8IWF2 684 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 BAP18Q8IXM2 172 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 LINC00311Q8N616 119 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 DDB2Q92466 427 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 VPREB3Q9UKI3 123 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 RCL1Q9Y2P8 373 aaKnown RBP10.65□□□□□ -0.7
SGCA-201ENST00000262018 FAM96BQ9Y3D0 163 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 KPTNQ9Y664 436 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 SAA2-SAA4A0A096LPE2 208 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 WI2-2373I1.2A0A1W2PRP0 233 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 MSGN1A6NI15 193 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 S1PR2O95136 353 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 SAA2P0DJI9 122 aaPredicted RBP10.64□□□□□ -0.71
SGCA-201ENST00000262018 IGLL1P15814 213 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 THBS3P49746 956 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 GNG10P50151 68 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 AKR1C2P52895 323 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 ERVFRD-1P60508 538 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 ZNF816Q0VGE8 651 aaPredicted RBP10.64□□□□□ -0.71
SGCA-201ENST00000262018 OR2B11Q5JQS5 317 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 UQCC3Q6UW78 93 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 C1orf122Q6ZSJ8 110 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 CCDC28AQ8IWP9 274 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 C11orf42Q8N5U0 333 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 DMBX1Q8NFW5 382 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 RNASE11Q8TAA1 199 aaKnown RBP10.64□□□□□ -0.71
SGCA-201ENST00000262018 RNF141Q8WVD5 230 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 R3HDM4Q96D70 268 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 ADTRPQ96IZ2 230 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 CITED4Q96RK1 184 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 COA4Q9NYJ1 87 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 ONECUT1Q9UBC0 465 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 PRELID3BQ9Y3B1 194 aa10.64□□□□□ -0.71
SGCA-201ENST00000262018 C3orf84H3BNL1 204 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 M0R1W7 72 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 SPDEFO95238 335 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 RBP4P02753 201 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 IGHV1-8P0DP01 117 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 P2RY1P47900 373 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 LINC00205P59089 165 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 ARF6P62330 175 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 CXorf66Q5JRM2 361 aaPredicted RBP10.63□□□□□ -0.71
SGCA-201ENST00000262018 Q6ZRM9 215 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 KLHDC1Q8N7A1 406 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 SAT2Q96F10 170 aaPredicted RBP10.63□□□□□ -0.71
SGCA-201ENST00000262018 S1PR3Q99500 378 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 B9D2Q9BPU9 175 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 SIRPDQ9H106 197 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 CACNG5Q9UF02 275 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 CACFD1Q9UGQ2 172 aa10.63□□□□□ -0.71
SGCA-201ENST00000262018 hCG_1809904A0A1W2PP81 198 aa10.62□□□□□ -0.71
SGCA-201ENST00000262018 A0A1W2PPE2 198 aa10.62□□□□□ -0.71
SGCA-201ENST00000262018 A0A1W2PR64 198 aa10.62□□□□□ -0.71
SGCA-201ENST00000262018 A0A1W2PRV1 198 aa10.62□□□□□ -0.71
SGCA-201ENST00000262018 TEX46H3BTG2 121 aa10.62□□□□□ -0.71
SGCA-201ENST00000262018 SHOXO15266 292 aa10.62□□□□□ -0.71
SGCA-201ENST00000262018 FCGR3BO75015 233 aa10.62□□□□□ -0.71
SGCA-201ENST00000262018 HPRT1P00492 218 aa10.62□□□□□ -0.71
SGCA-201ENST00000262018 RPL12P30050 165 aaKnown RBP10.62□□□□□ -0.71
SGCA-201ENST00000262018 POLR2GP62487 172 aaKnown RBP eCLIP10.62□□□□□ -0.71
SGCA-201ENST00000262018 FAM71F2Q6NXP2 309 aa10.62□□□□□ -0.71
SGCA-201ENST00000262018 ALKAL2Q6UX46 152 aa10.62□□□□□ -0.71
SGCA-201ENST00000262018 ZNF833PQ6ZTB9 187 aa10.62□□□□□ -0.71
SGCA-201ENST00000262018 BORCS7-ASMTA0A0B4J1R7 106 aa10.61□□□□□ -0.71
SGCA-201ENST00000262018 FAM90A26D6RGX4 464 aa10.61□□□□□ -0.71
SGCA-201ENST00000262018 RNASEK-C17orf49H0YIS7 233 aa10.61□□□□□ -0.71
SGCA-201ENST00000262018 J3QR06 171 aa10.61□□□□□ -0.71
SGCA-201ENST00000262018 SCAF4O95104 1147 aaKnown RBP10.61□□□□□ -0.71
SGCA-201ENST00000262018 G6PCP35575 357 aa10.61□□□□□ -0.71
SGCA-201ENST00000262018 IZUMO4Q1ZYL8 232 aa10.61□□□□□ -0.71
SGCA-201ENST00000262018 STPG2Q8N412 459 aa10.61□□□□□ -0.71
SGCA-201ENST00000262018 PIP4P2Q8N4L2 257 aa10.61□□□□□ -0.71
SGCA-201ENST00000262018 OR4F17Q8NGA8 305 aa10.61□□□□□ -0.71
SGCA-201ENST00000262018 OR9G1Q8NH87 305 aa10.61□□□□□ -0.71
SGCA-201ENST00000262018 OR4F4Q96R69 305 aa10.61□□□□□ -0.71
SGCA-201ENST00000262018 TMEM133Q9H2Q1 129 aa10.61□□□□□ -0.71
SGCA-201ENST00000262018 CYTL1Q9NRR1 136 aa10.61□□□□□ -0.71
SGCA-201ENST00000262018 RAB19A4D1S5 217 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 MFSD2BA6NFX1 497 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 FAM90A9PA6NNJ1 464 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 LY86O95711 162 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 KRASP01116 189 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 FBP1P09467 338 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 CD33P20138 364 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 M6PRP20645 277 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 ZP3P21754 424 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 ARHGDIBP52566 201 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 ZNF137PP52743 207 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 BAXQ07812 192 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 AANATQ16613 207 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 H2BFWTQ7Z2G1 175 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 VMO1Q7Z5L0 202 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 Q8N7P7 452 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 ZNF383Q8NA42 475 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 UBAC2Q8NBM4 344 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 OR4S2Q8NH73 311 aa10.6□□□□□ -0.71
SGCA-201ENST00000262018 TNFRSF14Q92956 283 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms