RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 TREML4Q6UXN2 200 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 MIR17HGQ75NE6 70 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 Q8NFD4 153 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 OR10G8Q8NGN5 311 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 SNRNP40Q96DI7 357 aaKnown RBP10.78□□□□□ -0.68
SNX1-201ENST00000261889 NAT8BQ9UHF3 227 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 GOLT1BQ9Y3E0 138 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 H0Y8G0 127 aa10.77□□□□□ -0.68
SNX1-201ENST00000261889 H3BTX0 84 aa10.77□□□□□ -0.68
SNX1-201ENST00000261889 M0QZ24 198 aa10.77□□□□□ -0.68
SNX1-201ENST00000261889 CD46P15529 392 aa10.77□□□□□ -0.68
SNX1-201ENST00000261889 GPR6P46095 362 aaPredicted RBP10.77□□□□□ -0.68
SNX1-201ENST00000261889 Q6ZS49 121 aa10.77□□□□□ -0.68
SNX1-201ENST00000261889 CISD2Q8N5K1 135 aaKnown RBP10.77□□□□□ -0.68
SNX1-201ENST00000261889 ZC2HC1AQ96GY0 325 aa10.77□□□□□ -0.68
SNX1-201ENST00000261889 DCHS2Q6V1P9 2916 aa10.77□□□□□ -0.68
SNX1-201ENST00000261889 LOC102724200A0A096LPH7 203 aaPredicted RBP10.77□□□□□ -0.69
SNX1-201ENST00000261889 TM4SF5O14894 197 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 AMTP48728 403 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 PMCHL1Q16048 86 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 PQLC2Q6ZP29 291 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 ACY3Q96HD9 319 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 VAMP8Q9BV40 100 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 TMEM106BQ9NUM4 274 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 CEP295Q9C0D2 2601 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 A0A1W2PN81 502 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 TOX4O94842 621 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 IGFBP2P18065 325 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 ZNF134P52741 427 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 SOX8P57073 446 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 C1orf194Q5T5A4 169 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 DCAF12Q5T6F0 453 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 TECTBQ96PL2 329 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 HSD17B10Q99714 261 aaKnown RBP10.77□□□□□ -0.69
SNX1-201ENST00000261889 ASCL2Q99929 193 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 GNB4Q9HAV0 340 aa10.77□□□□□ -0.69
SNX1-201ENST00000261889 ANKRD11Q6UB99 2663 aaPredicted RBP10.77□□□□□ -0.69
SNX1-201ENST00000261889 PTPRBP23467 1997 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A10PA6NDY2 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A18PA6NE21 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A16PA6NEW6 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A20PA6NIJ5 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A8PA6NJQ4 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A7PA6NKC0 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A22PA8MWA6 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A12PA8MX19 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A5PA8MXJ8 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A23PA8MXZ1 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A15PP0C7V4 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A13PP0C7W8 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A14PP0C7W9 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 FAM90A24PP0C7X0 464 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 MEOX1P50221 254 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 LGALS4P56470 323 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 OR4A16Q8NH70 328 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 SSBP4Q9BWG4 385 aaPredicted RBP10.76□□□□□ -0.69
SNX1-201ENST00000261889 RIMS4Q9H426 269 aaPredicted RBP10.76□□□□□ -0.69
SNX1-201ENST00000261889 AKAP13Q12802 2813 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 APC2O95996 2303 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 OR5B21A6NL26 309 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 SMPD2O60906 423 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 PAX1P15863 534 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 GPR12P47775 334 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 HINT1P49773 126 aaPredicted RBP10.76□□□□□ -0.69
SNX1-201ENST00000261889 TGIF2LYQ8IUE0 185 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 RND1Q92730 232 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 ANAPC16Q96DE5 110 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 LPAR2Q9HBW0 351 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 ZNF292O60281 2723 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 TIMM8AO60220 97 aaPredicted RBP10.76□□□□□ -0.69
SNX1-201ENST00000261889 OR7C2O60412 319 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 OR10J1P30954 320 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 UBE2NP61088 152 aaKnown RBP10.76□□□□□ -0.69
SNX1-201ENST00000261889 PSG5Q15238 335 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 TPTE2P1Q5T6R2 138 aa10.76□□□□□ -0.69
SNX1-201ENST00000261889 KLF14Q8TD94 323 aaPredicted RBP10.76□□□□□ -0.69
SNX1-201ENST00000261889 TRAV5A0A0B4J249 113 aa10.75□□□□□ -0.69
SNX1-201ENST00000261889 A0A1W2PNU3 283 aaPredicted RBP10.75□□□□□ -0.69
SNX1-201ENST00000261889 TMEM30CPA0ZSE6 113 aa10.75□□□□□ -0.69
SNX1-201ENST00000261889 SH2D7A6NKC9 451 aaPredicted RBP10.75□□□□□ -0.69
SNX1-201ENST00000261889 HTD2P86397 168 aa10.75□□□□□ -0.69
SNX1-201ENST00000261889 CATR1Q13166 79 aa10.75□□□□□ -0.69
SNX1-201ENST00000261889 C11orf42Q8N5U0 333 aa10.75□□□□□ -0.69
SNX1-201ENST00000261889 FAM168AQ92567 244 aa10.75□□□□□ -0.69
SNX1-201ENST00000261889 TBL2Q9Y4P3 447 aaKnown RBP10.75□□□□□ -0.69
SNX1-201ENST00000261889 MPC1Q9Y5U8 109 aa10.75□□□□□ -0.69
SNX1-201ENST00000261889 RPLP1P05386 114 aaKnown RBP10.75□□□□□ -0.69
SNX1-201ENST00000261889 RAB4AP20338 218 aa10.75□□□□□ -0.69
SNX1-201ENST00000261889 C6orf15Q6UXA7 325 aaPredicted RBP10.75□□□□□ -0.69
SNX1-201ENST00000261889 ARR3P36575 388 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 TBC1D28Q2M2D7 210 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 MMD2Q8IY49 270 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 OR5AU1Q8NGC0 362 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 GGTLC1Q9BX51 225 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 IGHV3-21A0A0B4J1V1 117 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 SRIP30626 198 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 PDLIM4P50479 330 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 COA6Q5JTJ3 125 aaKnown RBP10.74□□□□□ -0.69
SNX1-201ENST00000261889 MORN5Q5VZ52 161 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 SAXO1Q8IYX7 474 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms