RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 A0A087X0M5 115 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 A0A1B0GX30 115 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 F2RL2O00254 374 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 STAG3L2P0CL84 134 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 STAG3L3P0CL85 134 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 GNG10P50151 68 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 PKIAP61925 76 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 RPP30P78346 268 aaKnown RBP13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 KCNIP4Q6PIL6 250 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 ZNF474Q6S9Z5 364 aaPredicted RBP13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 SNRNP40Q96DI7 357 aaKnown RBP13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 DSCAML1Q8TD84 2053 aa13.46□□□□□ -0.25
TM9SF1-201ENST00000261789 OR4A47Q6IF82 309 aa13.46□□□□□ -0.25
TM9SF1-201ENST00000261789 LYG1Q8N1E2 194 aa13.46□□□□□ -0.25
TM9SF1-201ENST00000261789 SGMS2Q8NHU3 365 aa13.46□□□□□ -0.25
TM9SF1-201ENST00000261789 TUBG2Q9NRH3 451 aa13.46□□□□□ -0.25
TM9SF1-201ENST00000261789 AKAP13Q12802 2813 aa13.46□□□□□ -0.25
TM9SF1-201ENST00000261789 TSTD3H0UI37 97 aa13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 DVL1O14640 695 aa13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 TMPRSS2O15393 492 aa13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 MPDU1O75352 247 aa13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 IL6RP08887 468 aaPredicted RBP13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 FTH1P19P0C7X4 201 aa13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 CR1LQ2VPA4 569 aa13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 COA6Q5JTJ3 125 aaKnown RBP13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 C22orf34Q6ZV56 151 aa13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 MOB3BQ86TA1 216 aa13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 CISD2Q8N5K1 135 aaKnown RBP13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 OR52E5Q8NH55 327 aa13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 OCC1Q8TAD7 63 aa13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 PPP1R35Q8TAP8 253 aa13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 SFRP2Q96HF1 295 aa13.46□□□□□ -0.26
TM9SF1-201ENST00000261789 AHRRA9YTQ3 701 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 MMP23AO75900 390 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 TYMSP04818 313 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 KLF3P57682 345 aaPredicted RBP13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 MZT1Q08AG7 82 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 EFNB3Q15768 340 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 ZNF664Q8N3J9 261 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 STPG3Q8N7X2 389 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 OR5R1Q8NH85 324 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 NPVFQ9HCQ7 196 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 LSM4Q9Y4Z0 139 aaKnown RBP13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 TRAPPC1Q9Y5R8 145 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 FAM90A9PA6NNJ1 464 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 C15orf61A6NNL5 157 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 ACTL6BO94805 426 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 CA2P00918 260 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 LHBP01229 141 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 CGB3P0DN86 165 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 CGB7P0DN87 165 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 TMPRSS3P57727 454 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 OR4S2Q8NH73 311 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 RNASEH2CQ8TDP1 164 aaKnown RBP13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 ACY3Q96HD9 319 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 DCAF16Q9NXF7 216 aa13.45□□□□□ -0.26
TM9SF1-201ENST00000261789 F6UZH7 168 aa13.44□□□□□ -0.26
TM9SF1-201ENST00000261789 CXorf1O96002 111 aa13.44□□□□□ -0.26
TM9SF1-201ENST00000261789 IGFBP2P18065 325 aa13.44□□□□□ -0.26
TM9SF1-201ENST00000261789 PDLIM4P50479 330 aa13.44□□□□□ -0.26
TM9SF1-201ENST00000261789 RPL15P61313 204 aaKnown RBP13.44□□□□□ -0.26
TM9SF1-201ENST00000261789 TMEM144Q7Z5S9 345 aa13.44□□□□□ -0.26
TM9SF1-201ENST00000261789 TMEM256Q8N2U0 113 aa13.44□□□□□ -0.26
TM9SF1-201ENST00000261789 NUPR1O60356 82 aa13.44□□□□□ -0.26
TM9SF1-201ENST00000261789 NPY1RP25929 384 aa13.44□□□□□ -0.26
TM9SF1-201ENST00000261789 CNN1P51911 297 aaKnown RBP13.44□□□□□ -0.26
TM9SF1-201ENST00000261789 SLC24A4Q8NFF2 622 aa13.44□□□□□ -0.26
TM9SF1-201ENST00000261789 RAI1Q7Z5J4 1906 aaPredicted RBP13.43□□□□□ -0.26
TM9SF1-201ENST00000261789 SLC17A3O00476 420 aa13.43□□□□□ -0.26
TM9SF1-201ENST00000261789 CFHR2P36980 270 aa13.43□□□□□ -0.26
TM9SF1-201ENST00000261789 RPL31P62899 125 aaKnown RBP13.43□□□□□ -0.26
TM9SF1-201ENST00000261789 TMEM249Q2WGJ8 235 aa13.43□□□□□ -0.26
TM9SF1-201ENST00000261789 HLA-DRB5Q30154 266 aa13.43□□□□□ -0.26
TM9SF1-201ENST00000261789 TEPPQ6URK8 271 aa13.43□□□□□ -0.26
TM9SF1-201ENST00000261789 CCL13Q99616 98 aa13.43□□□□□ -0.26
TM9SF1-201ENST00000261789 KBTBD11-OT1A0A1B0GTJ5 212 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 A0A1B0GV90 55 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 IGKV1-16P04430 117 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 GATA2P23769 480 aaPredicted RBP13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 GCHFRP30047 84 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 MRPS11P82912 194 aaKnown RBP13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 MRPL41Q8IXM3 137 aaKnown RBP13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 OR4P4Q8NGL7 312 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 ELOVL5Q9NYP7 299 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 IDI2-AS1Q9NZ38 188 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 TANC2Q9HCD6 1990 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 MDFIC2A0A1B0GVS7 189 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 K7EN84 100 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 HSPE1P61604 102 aaKnown RBP13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 LCN2P80188 198 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 DNLZQ5SXM8 178 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 FAM216BQ8N7L0 139 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 GCM1Q9NP62 436 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 PARD6AQ9NPB6 346 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 TMEM14BQ9NUH8 114 aa13.42□□□□□ -0.26
TM9SF1-201ENST00000261789 GRIFINA4D1Z8 144 aa13.41□□□□□ -0.26
TM9SF1-201ENST00000261789 MLANAQ16655 118 aa13.41□□□□□ -0.26
TM9SF1-201ENST00000261789 MIR17HGQ75NE6 70 aa13.41□□□□□ -0.26
TM9SF1-201ENST00000261789 REC114Q7Z4M0 266 aa13.41□□□□□ -0.26
TM9SF1-201ENST00000261789 ZCCHC14Q8WYQ9 949 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms