RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 C5orf66Q9H5L9 145 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 ZNF207O43670 478 aaKnown RBP3.66□□□□□ -1.82
VPS13C-202ENST00000261517 SPNS3Q6ZMD2 512 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 VN1R17PQ8TDU5 208 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 IGHV3-13P01766 116 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 IGHG3P01860 377 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 P2RY4P51582 365 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 DMRTA1Q5VZB9 504 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 MRPL52Q86TS9 123 aaKnown RBP3.66□□□□□ -1.82
VPS13C-202ENST00000261517 C16orf92Q96LL3 132 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 MRPL37Q9BZE1 423 aaKnown RBP3.66□□□□□ -1.82
VPS13C-202ENST00000261517 C2orf16Q68DN1 1984 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 HTTP42858 3142 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 TRAV20A0A0B4J274 112 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 LOC101059948A0A1B0GTJ6 334 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 ANKRD34AQ69YU3 496 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 ASPHD2Q6ICH7 369 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 RELL2Q8NC24 303 aaPredicted RBP3.66□□□□□ -1.82
VPS13C-202ENST00000261517 RFESDQ8TAC1 157 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 KLHDC2Q9Y2U9 406 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 DLX1P56177 255 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 SPANXN1Q5VSR9 72 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 RNASEKQ6P5S7 137 aaKnown RBP3.66□□□□□ -1.82
VPS13C-202ENST00000261517 CYB561D1Q8N8Q1 229 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 OR4X2Q8NGF9 303 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 PKDREJQ9NTG1 2253 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 TRBV6-7A0A0A0MS04 114 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 A0A0G2JK05 382 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 F2Z2F3 143 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 F5H697 171 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 ZG16O60844 167 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 LY6G6FQ5SQ64 297 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 NTN1O95631 604 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 CLEC12BQ2HXU8 276 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 TMEM144Q7Z5S9 345 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 OR2D3Q8NGH3 330 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 C12orf57Q99622 126 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 J3QLI3 93 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 SIGLEC5O15389 551 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 BATFQ16520 125 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 C3AR1Q16581 482 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 GUCA2BQ16661 112 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 OTORQ9NRC9 128 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 HSPB7Q9UBY9 170 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 GLIPR1P48060 266 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 DCAF12L2Q5VW00 463 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 SOSTQ9BQB4 213 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 C2orf88Q9BSF0 95 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 FUT9Q9Y231 359 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 H3BRM9 83 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 SCGB1C2P0DMR2 95 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 SPATA31B1PQ5VZV4 182 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 NARFLQ9H6Q4 476 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 A0A1W2PRE2 83 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 C7orf77A4D0Y5 90 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 DEFB108AA8MXU0 73 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 CYP2G1PQ6ZSU1 146 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 TRANK1O15050 2925 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 NOTCH3Q9UM47 2321 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 SHANK1Q9Y566 2161 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 MBD3L4A6NDZ8 208 aaPredicted RBP3.65□□□□□ -1.82
VPS13C-202ENST00000261517 MBD3L3A6NE82 208 aaPredicted RBP3.65□□□□□ -1.82
VPS13C-202ENST00000261517 MBD3L5A6NJ08 208 aaPredicted RBP3.65□□□□□ -1.82
VPS13C-202ENST00000261517 IBA57Q5T440 356 aaKnown RBP3.65□□□□□ -1.82
VPS13C-202ENST00000261517 FAM53AQ6NSI3 398 aaPredicted RBP3.65□□□□□ -1.82
VPS13C-202ENST00000261517 BOD1L2Q8IYS8 172 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 MBD3L2Q8NHZ7 208 aaPredicted RBP3.65□□□□□ -1.82
VPS13C-202ENST00000261517 OR4C12Q96R67 309 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 FOXA2Q9Y261 457 aaPredicted RBP3.65□□□□□ -1.82
VPS13C-202ENST00000261517 PMS2P11Q13670 270 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 WDR25Q64LD2 544 aaPredicted RBP3.65□□□□□ -1.82
VPS13C-202ENST00000261517 BLNKQ8WV28 456 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 ZNF71Q9NQZ8 489 aaPredicted RBP3.65□□□□□ -1.82
VPS13C-202ENST00000261517 NAGKQ9UJ70 344 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 H3BP45 60 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 CECR9P0C854 216 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 STAG3L3P0CL85 134 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 FOLR2P14207 255 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 GATA4P43694 442 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 MSL2Q9HCI7 577 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 NUP210LQ5VU65 1888 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 EPOPA6NHQ4 379 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 FAM223BA6NKX1 122 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 HBBP68871 147 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 RSPO4Q2I0M5 234 aaPredicted RBP3.65□□□□□ -1.82
VPS13C-202ENST00000261517 FAM223AQ8IWN6 122 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 PACRGQ96M98 296 aaPredicted RBP3.65□□□□□ -1.82
VPS13C-202ENST00000261517 LAMTOR2Q9Y2Q5 125 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 MOB4Q9Y3A3 225 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 PHLDA3Q9Y5J5 127 aa3.65□□□□□ -1.82
VPS13C-202ENST00000261517 NXPH3O95157 252 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 DNLZQ5SXM8 178 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 ARPC1AQ92747 370 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 ZNF253O75346 499 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 DRAM1Q8N682 238 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 CCL13Q99616 98 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 IFI27L2Q9H2X8 130 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 PTPRQQ9UMZ3 2332 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 TRBV7-1A0A0A6YYK4 115 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 SSTR5P35346 364 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms