RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 DOLPP1Q86YN1 238 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 PARD6GQ9BYG4 376 aaPredicted RBP13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 M0R143 59 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 GCHFRP30047 84 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 Q6ZT83 130 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 PYGO2Q9BRQ0 406 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 GGTLC1Q9BX51 225 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 RPH3ALQ9UNE2 315 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 ZNF25P17030 456 aaPredicted RBP13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 CRYBB3P26998 211 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 GNG4P50150 75 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 LCN2P80188 198 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 SRSF6Q13247 344 aaKnown RBP13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 NHLRC2Q8NBF2 726 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 SLC24A4Q8NFF2 622 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 OR2V2Q96R30 315 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 NBASA2RRP1 2371 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 IGHV3-48P01763 117 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 IGFBP2P18065 325 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 OR10J1P30954 320 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 MRPS11P82912 194 aaKnown RBP13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 RPL19P84098 196 aaKnown RBP13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 HLA-DRB5Q30154 266 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 SIGLECL1Q8N7X8 197 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 MDS2Q8NDY4 140 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 OR4S2Q8NH73 311 aa13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 YTHDF2Q9Y5A9 579 aaKnown RBP13.42□□□□□ -0.26
SNCAIP-202ENST00000261368 TNRC6AQ8NDV7 1962 aaKnown RBP13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 TIMP3P35625 211 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 TIGITQ495A1 244 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 MORN2Q502X0 79 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 C9orf106Q8NAJ2 232 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 TUBG2Q9NRH3 451 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 COLQQ9Y215 455 aaPredicted RBP13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 ACACAQ13085 2346 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 CA2P00918 260 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 PRR27Q6MZM9 219 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 PQLC2Q6ZP29 291 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 C11orf53Q8IXP5 236 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 MRPL37Q9BZE1 423 aaKnown RBP13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 PROCRQ9UNN8 238 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 SERF1AO75920 110 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 SUMO1P63165 101 aaKnown RBP13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 MIR17HGQ75NE6 70 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 VAMP8Q9BV40 100 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 ELOVL5Q9NYP7 299 aa13.41□□□□□ -0.26
SNCAIP-202ENST00000261368 RPEL1Q2QD12 228 aa13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 RNASEH2CQ8TDP1 164 aaKnown RBP13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 TRBV20OR9-2A0A075B6H5 130 aa13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 HELTA6NFD8 242 aa13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 MPDU1O75352 247 aa13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 OPRK1P41145 380 aa13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 ASPHD1Q5U4P2 390 aa13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 CENPVQ7Z7K6 275 aaPredicted RBP13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 MOB3BQ86TA1 216 aa13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 IER2Q9BTL4 223 aa13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 CALYQ9NYX4 217 aa13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 TIMM8BQ9Y5J9 83 aaPredicted RBP13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 MGST3O14880 152 aa13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 AMTP48728 403 aa13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 DEFB123Q8N688 67 aa13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 FDCSPQ8NFU4 85 aa13.4□□□□□ -0.26
SNCAIP-202ENST00000261368 TRAV34A0A0B4J273 112 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 MZT1Q08AG7 82 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 EFNB3Q15768 340 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 MMD2Q8IY49 270 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 TCTEX1D1Q8N7M0 179 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 OR5AU1Q8NGC0 362 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 ITLN1Q8WWA0 313 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 SELENOVP59797 346 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 RNASE7Q9H1E1 156 aaKnown RBP13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 J3QR06 171 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 GFRA3O60609 400 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 STAG3L2P0CL84 134 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 STAG3L3P0CL85 134 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 REG1BP48304 166 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 PRR31Q5SQ13 230 aa13.39□□□□□ -0.27
SNCAIP-202ENST00000261368 ZNF134P52741 427 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 SARAFQ96BY9 339 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 TRGV10A0A0A0MS01 117 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 IGHV2OR16-5A0A0B4J2B6 119 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 MKRN2OSH3BPM6 223 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 J3QW42 95 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 FRMD6-AS1P0C7T7 363 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 FOSL1P15407 271 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 TNFSF10P50591 281 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 CENPWQ5EE01 88 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 OR4A47Q6IF82 309 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 SNHG12Q9BXW3 62 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 ZNRD1Q9P1U0 126 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 POLR3KQ9Y2Y1 108 aaPredicted RBP13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 OR51B2Q9Y5P1 312 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 UTF1Q5T230 341 aa13.38□□□□□ -0.27
SNCAIP-202ENST00000261368 KMT2EQ8IZD2 1858 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 IGKV1D-17A0A075B6S4 117 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 A6NNC1 897 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 ZNF253O75346 499 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 MLANAQ16655 118 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 DEFB109BQ30KR1 87 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 TRAT1Q6PIZ9 186 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms