RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 STPG3Q8N7X2 389 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 TM4SF19Q96DZ7 209 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 RP1L1Q8IWN7 2480 aaPredicted RBP7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 SCO2A0A1W2PP80 73 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 GAGE12HA6NDE8 117 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 ZNF716A6NP11 495 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 VEGFBP49765 207 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 CX3CL1P78423 397 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 KIR3DS1Q14943 382 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 FBXW9Q5XUX1 488 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 ADAMTSL5Q6ZMM2 481 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 MUC15Q8N387 334 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 GCSAMQ8N6F7 178 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 DOCK6Q96HP0 2047 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 DPM2O94777 84 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 CCL1P22362 96 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 CIRBPQ14011 172 aaKnown RBP7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 CT83Q5H943 113 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 TMEM144Q7Z5S9 345 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 ORMDL3Q8N138 153 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 TMEM178AQ8NBL3 297 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 ZNF418Q8TF45 676 aaPredicted RBP7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 ST6GALNAC6Q969X2 333 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 NABP2Q9BQ15 211 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 IL23AQ9NPF7 189 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 NHP2Q9NX24 153 aaKnown RBP7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 CLEC5AQ9NY25 188 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 LOC389332A0A1B0GUA5 103 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 SYS1-DBNDD2H3BUS1 97 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 K7ESF4 209 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 PEX7O00628 323 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 IL18BPO95998 194 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 RBP4P02753 201 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 APOBEC3AP31941 199 aaPredicted RBP7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 PRSS53Q2L4Q9 553 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 TMEM256Q8N2U0 113 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 CTHRC1Q96CG8 243 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 MS4A5Q9H3V2 200 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 TET1Q8NFU7 2136 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 TMEM229AB2RXF0 380 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 CXCL13O43927 109 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 SRFP11831 508 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 LYZP61626 148 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 DEFB133Q30KQ1 61 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 BATF2Q8N1L9 274 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 DECR2Q9NUI1 292 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 HCFC1R1Q9NWW0 138 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 CCL26Q9Y258 94 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 CNTRLQ7Z7A1 2325 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 CEP290O15078 2479 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 COL4A6Q14031 1691 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 PRNTQ86SH4 94 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 FLYWCH2Q96CP2 140 aaKnown RBP7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 RASL11BQ9BPW5 248 aa7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 AKIRIN1Q9H9L7 192 aaPredicted RBP7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 NXT2Q9NPJ8 142 aaKnown RBP7.09□□□□□ -1.27
SNCAIP-201ENST00000261367 SAA2-SAA4A0A096LPE2 208 aa7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 MUC21A0A0G2JKD1 596 aa7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 MUC21A0A140T8X8 626 aa7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 J3QW42 95 aa7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 SRD5A2P31213 254 aa7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 ATP5G3P48201 142 aa7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 REG1BP48304 166 aa7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 SPINK9Q5DT21 86 aa7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 MUC21Q5SSG8 566 aa7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 SHISA6Q6ZSJ9 500 aa7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 CIARTQ8N365 385 aaPredicted RBP7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 TPRX1Q8N7U7 411 aa7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 ZNF502Q8TBZ5 544 aa7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 ZNF775Q96BV0 537 aaPredicted RBP7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 UFC1Q9Y3C8 167 aa7.09□□□□□ -1.28
SNCAIP-201ENST00000261367 PGPA6NDG6 321 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 MT-CO3P00414 261 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 DUSP2Q05923 314 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 LYG1Q8N1E2 194 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 PPDPFLQ8WWR9 84 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 RLN3Q8WXF3 142 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 DYNLRB1Q9NP97 96 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 HILPDAQ9Y5L2 63 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 CASP8AP2Q9UKL3 1982 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 CCDC88CQ9P219 2028 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 TRBV20-1A0A075B6N2 111 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 TRAV5A0A0B4J249 113 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 IL9P15248 144 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 LGALS4P56470 323 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 FOXL2P58012 376 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 PDCD1Q15116 288 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 TAL2Q16559 108 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 SPSB3Q6PJ21 355 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 RTN4RL2Q86UN3 420 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 GGTLC1Q9BX51 225 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 IGKV1D-42A0A075B6H8 117 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 SCTP09683 121 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 C17orf99Q6UX52 265 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 LHFPL4Q7Z7J7 247 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 ZAR1Q86SH2 424 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 RPRMLQ8N4K4 120 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 CACNG8Q8WXS5 425 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 GPR82Q96P67 336 aa7.08□□□□□ -1.28
SNCAIP-201ENST00000261367 MLNRO43193 412 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms