RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 RPEL1Q2QD12 228 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 TIPARPQ7Z3E1 657 aaKnown RBP13.2□□□□□ -0.3
LMNB1-201ENST00000261366 STARD4Q96DR4 205 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 ZNF586Q9NXT0 402 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 TNCP24821 2201 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 LYZL6O75951 148 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 CRYBB3P26998 211 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 MPV17P39210 176 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 GCNT2Q8N0V5 402 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 DEFB127Q9H1M4 99 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 NRN1Q9NPD7 142 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 GNG12Q9UBI6 72 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 CADP27708 2225 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 OOEPA6NGQ2 149 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 M0R1X1 148 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 ZNF253O75346 499 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 MGST1P10620 155 aaKnown RBP13.19□□□□□ -0.3
LMNB1-201ENST00000261366 GATA2P23769 480 aaPredicted RBP13.19□□□□□ -0.3
LMNB1-201ENST00000261366 SELENOTP62341 195 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 ZNF146Q15072 292 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 OR1C1Q15619 314 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 COL5A1-AS1Q5SY13 56 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 LCN12Q6JVE5 192 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 PQLC2Q6ZP29 291 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 ERASQ7Z444 233 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 CT55Q8WUE5 264 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 TAAR6Q96RI8 345 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 TTTY12Q9BZ98 90 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 ARFGEF3Q5TH69 2177 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 A8MXE2 369 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 AHRRA9YTQ3 701 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 GPR12P47775 334 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 DUSP3P51452 185 aaPredicted RBP13.19□□□□□ -0.3
LMNB1-201ENST00000261366 LGALS4P56470 323 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 TBC1D28Q2M2D7 210 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 TMEM251Q8N6I4 163 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 FAM216AQ8WUB2 273 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 BDP1A6H8Y1 2624 aa13.19□□□□□ -0.3
LMNB1-201ENST00000261366 OR10J4P0C629 311 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 SRIP30626 198 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 HINT1P49773 126 aaPredicted RBP13.18□□□□□ -0.3
LMNB1-201ENST00000261366 EFNB3Q15768 340 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 Q8IYB0 196 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 Q8TCH9 128 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 EAF1Q96JC9 268 aaPredicted RBP13.18□□□□□ -0.3
LMNB1-201ENST00000261366 CFAP47Q6ZTR5 3102 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 TECTAO75443 2155 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 GPX1P07203 203 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 EIF4EBP1Q13541 118 aaPredicted RBP13.18□□□□□ -0.3
LMNB1-201ENST00000261366 CENPWQ5EE01 88 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 ABHD17BQ5VST6 288 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 MIR17HGQ75NE6 70 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 MOB3BQ86TA1 216 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 STPG3Q8N7X2 389 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 B4GALT7Q9UBV7 327 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 TNRC6BQ9UPQ9 1833 aaKnown RBP13.18□□□□□ -0.3
LMNB1-201ENST00000261366 SMPD2O60906 423 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 PROP1O75360 226 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 CYC1P08574 325 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 PSG5Q15238 335 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 TMEM105Q8N8V8 129 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 SLC35E1Q96K37 410 aa13.18□□□□□ -0.3
LMNB1-201ENST00000261366 TET2Q6N021 2002 aaPredicted RBP13.17□□□□□ -0.3
LMNB1-201ENST00000261366 AGFG2O95081 481 aa13.17□□□□□ -0.3
LMNB1-201ENST00000261366 OPRK1P41145 380 aa13.17□□□□□ -0.3
LMNB1-201ENST00000261366 TRIP6Q15654 476 aaKnown RBP13.17□□□□□ -0.3
LMNB1-201ENST00000261366 ZNF718Q3SXZ3 478 aa13.17□□□□□ -0.3
LMNB1-201ENST00000261366 UTF1Q5T230 341 aa13.17□□□□□ -0.3
LMNB1-201ENST00000261366 ZBTB34Q8NCN2 500 aa13.17□□□□□ -0.3
LMNB1-201ENST00000261366 HSD17B10Q99714 261 aaKnown RBP13.17□□□□□ -0.3
LMNB1-201ENST00000261366 FAM173AQ9BQD7 235 aa13.17□□□□□ -0.3
LMNB1-201ENST00000261366 SSBP3Q9BWW4 388 aaPredicted RBP13.17□□□□□ -0.3
LMNB1-201ENST00000261366 OR5G3P0C626 314 aa13.17□□□□□ -0.3
LMNB1-201ENST00000261366 GNG4P50150 75 aa13.17□□□□□ -0.3
LMNB1-201ENST00000261366 GNG10P50151 68 aa13.17□□□□□ -0.3
LMNB1-201ENST00000261366 FABP6P51161 128 aa13.17□□□□□ -0.3
LMNB1-201ENST00000261366 HNRNPA3P51991 378 aaKnown RBP13.17□□□□□ -0.3
LMNB1-201ENST00000261366 GAGE1Q13065 139 aa13.17□□□□□ -0.3
LMNB1-201ENST00000261366 PEAR1Q5VY43 1037 aaPredicted RBP13.17□□□□□ -0.3
LMNB1-201ENST00000261366 IGFBP2P18065 325 aa13.16□□□□□ -0.3
LMNB1-201ENST00000261366 ZNF83P51522 516 aa13.16□□□□□ -0.3
LMNB1-201ENST00000261366 ARG2P78540 354 aa13.16□□□□□ -0.3
LMNB1-201ENST00000261366 RAB1CQ92928 201 aa13.16□□□□□ -0.3
LMNB1-201ENST00000261366 TP73-AS1Q9UF72 201 aa13.16□□□□□ -0.3
LMNB1-201ENST00000261366 V9GYV3 84 aa13.16□□□□□ -0.3
LMNB1-201ENST00000261366 A0A1W2PS18 150 aa13.15□□□□□ -0.3
LMNB1-201ENST00000261366 HELTA6NFD8 242 aa13.15□□□□□ -0.3
LMNB1-201ENST00000261366 OR7C2O60412 319 aa13.15□□□□□ -0.3
LMNB1-201ENST00000261366 GFRA3O60609 400 aa13.15□□□□□ -0.3
LMNB1-201ENST00000261366 UNQ5815/PRO19632Q6UWF5 114 aa13.15□□□□□ -0.3
LMNB1-201ENST00000261366 Q8N976 141 aa13.15□□□□□ -0.3
LMNB1-201ENST00000261366 BCL2L2Q92843 193 aaPredicted RBP13.15□□□□□ -0.3
LMNB1-201ENST00000261366 C1orf159Q96HA4 380 aa13.15□□□□□ -0.3
LMNB1-201ENST00000261366 GP6Q9HCN6 339 aa13.15□□□□□ -0.3
LMNB1-201ENST00000261366 PPP1R14DQ9NXH3 145 aa13.15□□□□□ -0.3
LMNB1-201ENST00000261366 HYPMO75409 117 aa13.15□□□□□ -0.3
LMNB1-201ENST00000261366 LINC00614P0C842 121 aa13.15□□□□□ -0.3
LMNB1-201ENST00000261366 DUTP33316 252 aaKnown RBP13.15□□□□□ -0.3
LMNB1-201ENST00000261366 RNF2Q99496 336 aa13.15□□□□□ -0.3
LMNB1-201ENST00000261366 ZFP30Q9Y2G7 519 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms