RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TSPOP30536 169 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 EMP1P54849 157 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 C18orf15Q96N68 181 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 GDF15Q99988 308 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 MRPL32Q9BYC8 188 aaKnown RBP10.24□□□□□ -0.77
COL8A1-201ENST00000261037 GEMIN7Q9H840 131 aaKnown RBP10.24□□□□□ -0.77
COL8A1-201ENST00000261037 C17orf98A8MV24 154 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 M0R381 172 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 DANCRP0C864 163 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 CDKN1AP38936 164 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 DNM1P46Q6ZS02 220 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 LHFPL5Q8TAF8 219 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 ABHD17AQ96GS6 310 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 TUBA4BQ9H853 241 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 TMEM160Q9NX00 188 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 CNTRLQ7Z7A1 2325 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 C12orf77C9JDV5 145 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 CGAP01215 116 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 CLEC19AQ6UXS0 136 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 LDLRAD4O15165 306 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 COL25A1Q9BXS0 654 aaPredicted RBP10.24□□□□□ -0.77
COL8A1-201ENST00000261037 FBXL7Q9UJT9 491 aa10.24□□□□□ -0.77
COL8A1-201ENST00000261037 A0A0B4J293 547 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 CEACAM4O75871 244 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 IGHV1-2P23083 117 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 CBLN1P23435 193 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 RNASE4P34096 147 aaKnown RBP10.23□□□□□ -0.77
COL8A1-201ENST00000261037 ZNF837Q96EG3 531 aaPredicted RBP10.23□□□□□ -0.77
COL8A1-201ENST00000261037 NPCDR1Q9BY65 106 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 PRB4P10163 310 aaPredicted RBP10.23□□□□□ -0.77
COL8A1-201ENST00000261037 FOLR2P14207 255 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 GPR183P32249 361 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 PLP1P60201 277 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 TEX29Q8N6K0 151 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 TEX45Q8NA69 505 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 MRPL20Q9BYC9 149 aaKnown RBP10.23□□□□□ -0.77
COL8A1-201ENST00000261037 ZNF708P17019 499 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 SUMO2P61956 95 aaKnown RBP10.23□□□□□ -0.77
COL8A1-201ENST00000261037 OR10AG1Q8NH19 301 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 IGHV2OR16-5A0A0B4J2B6 119 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 ZNF98A6NK75 572 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 SLC17A3O00476 420 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 TRGC1P0CF51 173 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 FOXA3P55318 350 aaPredicted RBP10.23□□□□□ -0.77
COL8A1-201ENST00000261037 TXNDC17Q9BRA2 123 aa10.23□□□□□ -0.77
COL8A1-201ENST00000261037 TRAV24A0A0B4J272 114 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 IGHV3-11P01762 117 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 LINC00470Q9BZP3 86 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 TIMM23BQ5SRD1 257 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 WDR82Q6UXN9 313 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 PPP1R27Q86WC6 154 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 DUX3Q96PT4 197 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 SCO2A0A1W2PP80 73 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 HTN3P15516 51 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 LAIR2Q6ISS4 152 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 TMEM136Q6ZRR5 245 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 CBLN4Q9NTU7 201 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 GATA2P23769 480 aaPredicted RBP10.22□□□□□ -0.77
COL8A1-201ENST00000261037 SLC25A34Q6PIV7 304 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 TCF24Q7RTU0 167 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 MRPL13Q9BYD1 178 aaKnown RBP10.22□□□□□ -0.77
COL8A1-201ENST00000261037 CIRBPQ14011 172 aaKnown RBP10.22□□□□□ -0.77
COL8A1-201ENST00000261037 PMCHL1Q16048 86 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 KIR2DL4Q99706 377 aa10.22□□□□□ -0.77
COL8A1-201ENST00000261037 MRAP2Q96G30 205 aa10.21□□□□□ -0.77
COL8A1-201ENST00000261037 DMRTA2Q96SC8 542 aa10.21□□□□□ -0.77
COL8A1-201ENST00000261037 IFI27L2Q9H2X8 130 aa10.21□□□□□ -0.77
COL8A1-201ENST00000261037 SNAI2O43623 268 aa10.21□□□□□ -0.77
COL8A1-201ENST00000261037 HLA-DRB1P01911 266 aa10.21□□□□□ -0.77
COL8A1-201ENST00000261037 CSRP2Q16527 193 aa10.21□□□□□ -0.77
COL8A1-201ENST00000261037 IMMP2LQ96T52 175 aa10.21□□□□□ -0.77
COL8A1-201ENST00000261037 LOC390937A0A1W2PQ73 354 aa10.21□□□□□ -0.78
COL8A1-201ENST00000261037 SHISA3A0PJX4 238 aa10.21□□□□□ -0.78
COL8A1-201ENST00000261037 UCP3P55916 312 aa10.21□□□□□ -0.78
COL8A1-201ENST00000261037 HBBP68871 147 aa10.21□□□□□ -0.78
COL8A1-201ENST00000261037 C2orf68Q2NKX9 166 aa10.21□□□□□ -0.78
COL8A1-201ENST00000261037 TMEM170BQ5T4T1 132 aa10.21□□□□□ -0.78
COL8A1-201ENST00000261037 FAM168AQ92567 244 aa10.21□□□□□ -0.78
COL8A1-201ENST00000261037 CHRNA10Q9GZZ6 450 aa10.21□□□□□ -0.78
COL8A1-201ENST00000261037 C9orf106Q8NAJ2 232 aa10.21□□□□□ -0.78
COL8A1-201ENST00000261037 ARPC1AQ92747 370 aa10.21□□□□□ -0.78
COL8A1-201ENST00000261037 UQCR10Q9UDW1 63 aa10.21□□□□□ -0.78
COL8A1-201ENST00000261037 SELENOKQ9Y6D0 94 aa10.21□□□□□ -0.78
COL8A1-201ENST00000261037 C1QTNF12Q5T7M4 302 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 CLDND2Q8NHS1 167 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 GLMPQ8WWB7 406 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 MPTX1A8MV57 137 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 GLRXP35754 106 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 FAM57AQ8TBR7 257 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 CD24P25063 80 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 ASIPP42127 132 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 ZP1P60852 638 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 TRAV8-6A0A0B4J262 113 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 IFI6P09912 130 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 ST6GALNAC6Q969X2 333 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 WNT10AQ9GZT5 417 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 YAE1D1Q9NRH1 226 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 ATP5G3P48201 142 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 IFITM2Q01629 132 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 MIR17HGQ75NE6 70 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms