RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 ASCL2Q99929 193 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 MRPL16Q9NX20 251 aaKnown RBP3.4□□□□□ -1.87
RNF38-201ENST00000259605 TRGV1A0A0A0MS02 117 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 A0A1B0GWJ7 208 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 TCRBP04435 133 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 CD7P09564 240 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 HKR1P10072 659 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 CAMPP49913 170 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 HAGHQ16775 308 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 SLC25A47Q6Q0C1 308 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 ZNF680Q8NEM1 530 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 GATAD1Q8WUU5 269 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 IL36RNQ9UBH0 155 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 RREB1Q92766 1687 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 ESPL1Q14674 2120 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 BCORQ6W2J9 1755 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 IGLV3-12A0A075B6K2 115 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 TCRBV3S1A0A5B6 114 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 IFITM10A6NMD0 228 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 FOXI3A8MTJ6 420 aaPredicted RBP3.39□□□□□ -1.87
RNF38-201ENST00000259605 DEFB130BP0DP73 79 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 DEFB130AP0DP74 79 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 GATA2P23769 480 aaPredicted RBP3.39□□□□□ -1.87
RNF38-201ENST00000259605 POLR2IP36954 125 aaKnown RBP3.39□□□□□ -1.87
RNF38-201ENST00000259605 PGFP49763 221 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 DAPP51397 102 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 DYNLT3P51808 116 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 UBE2E1P51965 193 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 CD81P60033 236 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 AANATQ16613 207 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 VWC2Q2TAL6 325 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 SPINK9Q5DT21 86 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 PLA2G2CQ5R387 149 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 IGF2-ASQ6U949 168 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 HOGA1Q86XE5 327 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 FAM169BQ8N8A8 192 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 RNASEH2CQ8TDP1 164 aaKnown RBP3.39□□□□□ -1.87
RNF38-201ENST00000259605 GSX1Q9H4S2 264 aaPredicted RBP3.39□□□□□ -1.87
RNF38-201ENST00000259605 NDUFA12Q9UI09 145 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 A0A087WV48 116 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 ZAR1LA6NP61 321 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 PDGFAP04085 211 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 REG1AP05451 166 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 GALP22466 123 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 TMEM241Q24JQ0 296 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 TMEM144Q7Z5S9 345 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 FAM216BQ8N7L0 139 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 TPRX1Q8N7U7 411 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 RBFOX1Q9NWB1 397 aaKnown RBP3.39□□□□□ -1.87
RNF38-201ENST00000259605 OR5AC2Q9NZP5 309 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 TRAV39A0A0B4J263 110 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 NAPSAO96009 420 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 MYCNOSP40205 109 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 IFI27P40305 119 aaPredicted RBP3.39□□□□□ -1.87
RNF38-201ENST00000259605 MFAP2P55001 183 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 TMEM249Q2WGJ8 235 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 BRD3OSQ6XYD6 125 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 RNF144BQ7Z419 303 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 PIP4P1Q86T03 277 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 DMRTA2Q96SC8 542 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 CDCA4Q9BXL8 241 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 NPCDR1Q9BY65 106 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 CCL28Q9NRJ3 127 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 ANAPC10Q9UM13 185 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 M0R2Z0 102 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 RHODO00212 210 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 NDUFA4O00483 81 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 SFT2D2O95562 160 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 IGF2P01344 180 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 IGHG3P01860 377 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 HLA-DQA1P01909 254 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 APCSP02743 223 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 SPART-AS1P0CW21 52 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 C8orf88P0DMB2 117 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 PI3P19957 117 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 PRTN3P24158 256 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 HCCSP53701 268 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 OR5C1Q8NGR4 320 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 SPATA25Q9BR10 227 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 ZNF696Q9H7X3 374 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 SRD5A3Q9H8P0 318 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 TNS1Q9HBL0 1735 aaKnown RBP3.39□□□□□ -1.87
RNF38-201ENST00000259605 RGPD3A6NKT7 1758 aaPredicted RBP3.39□□□□□ -1.87
RNF38-201ENST00000259605 DIDO1Q9BTC0 2240 aaKnown RBP3.39□□□□□ -1.87
RNF38-201ENST00000259605 ZNF831Q5JPB2 1677 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 DOCK1Q14185 1865 aa3.39□□□□□ -1.87
RNF38-201ENST00000259605 A0A1W2PPQ1 181 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 A0A1W2PPV9 198 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 RRHO14718 337 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 SIGLEC5O15389 551 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 MLNRO43193 412 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 CA1P00915 261 aaPredicted RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 TRGC2P03986 189 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 PRB1P04280 392 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 RNASE4P34096 147 aaKnown RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 FGF8P55075 233 aaPredicted RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 FAM74A3Q4VXF1 159 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 MORN3Q6PF18 240 aaPredicted RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 GLDNQ6ZMI3 551 aaPredicted RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 C9orf139Q6ZV77 190 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms