RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 PDPNQ86YL7 162 aa14.07□□□□□ -0.16
SRSF1-201ENST00000258962 UBAC2Q8NBM4 344 aa14.07□□□□□ -0.16
SRSF1-201ENST00000258962 SMIM8Q96KF7 97 aa14.07□□□□□ -0.16
SRSF1-201ENST00000258962 CITED4Q96RK1 184 aa14.07□□□□□ -0.16
SRSF1-201ENST00000258962 UNKLQ9H9P5 680 aaKnown RBP14.07□□□□□ -0.16
SRSF1-201ENST00000258962 AMMECR1Q9Y4X0 333 aaPredicted RBP14.07□□□□□ -0.16
SRSF1-201ENST00000258962 KPTNQ9Y664 436 aa14.07□□□□□ -0.16
SRSF1-201ENST00000258962 ODF3BA8MYP8 253 aa14.06□□□□□ -0.16
SRSF1-201ENST00000258962 H7C2Y5 167 aa14.06□□□□□ -0.16
SRSF1-201ENST00000258962 COMMD7Q86VX2 200 aa14.06□□□□□ -0.16
SRSF1-201ENST00000258962 OSR1Q8TAX0 266 aaPredicted RBP14.06□□□□□ -0.16
SRSF1-201ENST00000258962 ZDHHC16Q969W1 377 aa14.06□□□□□ -0.16
SRSF1-201ENST00000258962 PSENENQ9NZ42 101 aa14.06□□□□□ -0.16
SRSF1-201ENST00000258962 WASHC3Q9Y3C0 194 aa14.06□□□□□ -0.16
SRSF1-201ENST00000258962 INSIG2Q9Y5U4 225 aa14.06□□□□□ -0.16
SRSF1-201ENST00000258962 LEUTXA8MZ59 168 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 RBMXL2O75526 392 aaKnown RBP14.05□□□□□ -0.16
SRSF1-201ENST00000258962 CST7O76096 145 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 ARG1P05089 322 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 SCGB2A2Q13296 93 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 ZNF266Q14584 549 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 SPINK9Q5DT21 86 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 STX12Q86Y82 276 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 OR4A16Q8NH70 328 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 NANPQ8TBE9 248 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 PCNPQ8WW12 178 aaKnown RBP14.05□□□□□ -0.16
SRSF1-201ENST00000258962 LHX4Q969G2 390 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 IGHV1-3A0A0C4DH29 117 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 C15orf61A6NNL5 157 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 NUDT19A8MXV4 375 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 RNASEK-C17orf49H0YIS7 233 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 SHOXO15266 292 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 SCAF4O95104 1147 aaKnown RBP14.05□□□□□ -0.16
SRSF1-201ENST00000258962 AVPP01185 164 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 SAA1P0DJI8 122 aaPredicted RBP14.05□□□□□ -0.16
SRSF1-201ENST00000258962 TMEM267Q0VDI3 215 aaPredicted RBP14.05□□□□□ -0.16
SRSF1-201ENST00000258962 PDLIM3Q53GG5 364 aaPredicted RBP14.05□□□□□ -0.16
SRSF1-201ENST00000258962 ZNF429Q86V71 674 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 PRIMA1Q86XR5 153 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 PUSL1Q8N0Z8 303 aaKnown RBP14.05□□□□□ -0.16
SRSF1-201ENST00000258962 DTD1Q8TEA8 209 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 HARBI1Q96MB7 349 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 AIFM2Q9BRQ8 373 aa14.05□□□□□ -0.16
SRSF1-201ENST00000258962 IGHV3-72A0A0B4J1Y9 119 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 A0A1W2PPI3 338 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 ANKRD34BA5PLL1 514 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 UPK2O00526 184 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 MC5RP33032 325 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 RAB13P51153 203 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 FAM74A1Q5RGS3 127 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 TPTE2P1Q5T6R2 138 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 HAPLN4Q86UW8 402 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 OR4C13Q8NGP0 309 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 OR52E5Q8NH55 327 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 RPEQ96AT9 228 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 FLYWCH2Q96CP2 140 aaKnown RBP14.04□□□□□ -0.16
SRSF1-201ENST00000258962 SAT2Q96F10 170 aaPredicted RBP14.04□□□□□ -0.16
SRSF1-201ENST00000258962 TBX15Q96SF7 602 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 TMEM14BQ9NUH8 114 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 BET1LQ9NYM9 111 aa14.04□□□□□ -0.16
SRSF1-201ENST00000258962 FOXA2Q9Y261 457 aaPredicted RBP14.04□□□□□ -0.16
SRSF1-201ENST00000258962 CEBPZOSA8MTT3 80 aa14.03□□□□□ -0.16
SRSF1-201ENST00000258962 DFFBO76075 338 aa14.03□□□□□ -0.16
SRSF1-201ENST00000258962 IFNA17P01571 189 aa14.03□□□□□ -0.16
SRSF1-201ENST00000258962 IGLV2-23P01705 113 aa14.03□□□□□ -0.16
SRSF1-201ENST00000258962 HTR1DP28221 377 aa14.03□□□□□ -0.16
SRSF1-201ENST00000258962 SULT1A1P50225 295 aa14.03□□□□□ -0.16
SRSF1-201ENST00000258962 DYNLT3P51808 116 aa14.03□□□□□ -0.16
SRSF1-201ENST00000258962 SPCS3P61009 180 aa14.03□□□□□ -0.16
SRSF1-201ENST00000258962 PAX8Q06710 450 aa14.03□□□□□ -0.16
SRSF1-201ENST00000258962 KRTAP21-3Q3LHN1 58 aa14.03□□□□□ -0.16
SRSF1-201ENST00000258962 CIB3Q96Q77 187 aaPredicted RBP14.03□□□□□ -0.16
SRSF1-201ENST00000258962 OR4C12Q96R67 309 aa14.03□□□□□ -0.16
SRSF1-201ENST00000258962 ARV1Q9H2C2 271 aa14.03□□□□□ -0.16
SRSF1-201ENST00000258962 FGF16O43320 207 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 SEC11BP0C7V7 166 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 METTL15P1P0C7V9 234 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 MYOD1P15172 320 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 BLOC1S1P78537 153 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 ARL16Q0P5N6 197 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 CLINT1Q14677 625 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 SPANXN5Q5MJ07 72 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 TMEM14EPQ6UXP3 125 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 LHFPL4Q7Z7J7 247 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 MOB3BQ86TA1 216 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 TMEM217Q8N7C4 229 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 OR5C1Q8NGR4 320 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 RITA1Q96K30 269 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 MS4A7Q9GZW8 240 aaPredicted RBP14.02□□□□□ -0.16
SRSF1-201ENST00000258962 DPM3Q9P2X0 92 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 TCF19Q9Y242 345 aa14.02□□□□□ -0.16
SRSF1-201ENST00000258962 ANK3Q12955 4377 aaKnown RBP14.02□□□□□ -0.17
SRSF1-201ENST00000258962 A0A1W2PRD5 423 aa14.01□□□□□ -0.17
SRSF1-201ENST00000258962 A0A1W2PRF3 423 aa14.01□□□□□ -0.17
SRSF1-201ENST00000258962 A0A1W2PRM7 423 aa14.01□□□□□ -0.17
SRSF1-201ENST00000258962 KBTBD11O94819 623 aa14.01□□□□□ -0.17
SRSF1-201ENST00000258962 TOX4O94842 621 aa14.01□□□□□ -0.17
SRSF1-201ENST00000258962 VDAC2P45880 294 aaPredicted RBP14.01□□□□□ -0.17
SRSF1-201ENST00000258962 RPS16P62249 146 aaKnown RBP14.01□□□□□ -0.17
SRSF1-201ENST00000258962 HSD17B13Q7Z5P4 300 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms