RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 DEFA4P12838 97 aa14.35□□□□□ -0.11
TM6SF1-201ENST00000258909 RPA2P15927 270 aa14.35□□□□□ -0.11
TM6SF1-201ENST00000258909 CTRB1P17538 263 aa14.35□□□□□ -0.11
TM6SF1-201ENST00000258909 MSMO1Q15800 293 aa14.35□□□□□ -0.11
TM6SF1-201ENST00000258909 CTRB2Q6GPI1 263 aa14.35□□□□□ -0.11
TM6SF1-201ENST00000258909 DEFB125Q8N687 156 aa14.35□□□□□ -0.11
TM6SF1-201ENST00000258909 ZBTB34Q8NCN2 500 aa14.35□□□□□ -0.11
TM6SF1-201ENST00000258909 OR5AP2Q8NGF4 316 aa14.35□□□□□ -0.11
TM6SF1-201ENST00000258909 LYSTQ99698 3801 aa14.34□□□□□ -0.11
TM6SF1-201ENST00000258909 ZNF320A2RRD8 509 aa14.34□□□□□ -0.11
TM6SF1-201ENST00000258909 OR2B8PP59922 312 aa14.34□□□□□ -0.11
TM6SF1-201ENST00000258909 KCTD21Q4G0X4 260 aa14.34□□□□□ -0.11
TM6SF1-201ENST00000258909 GIMAP1Q8WWP7 306 aa14.34□□□□□ -0.11
TM6SF1-201ENST00000258909 WDR89Q96FK6 387 aaPredicted RBP14.34□□□□□ -0.11
TM6SF1-201ENST00000258909 CEPT1Q9Y6K0 416 aa14.34□□□□□ -0.11
TM6SF1-201ENST00000258909 MFSD2BA6NFX1 497 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 TPPPO94811 219 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 S1PR2O95136 353 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 DHFRP00374 187 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 HPRT1P00492 218 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 LSM3P62310 102 aaKnown RBP14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 CATR1Q13166 79 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 FAM209BQ5JX69 171 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 AADACL3Q5VUY0 350 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 GPHB5Q86YW7 130 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 OR4A5Q8NH83 315 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 EEF1AKMT3Q96AZ1 226 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 FAM110AQ9BQ89 295 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 IFT46Q9NQC8 304 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 SLC2A8Q9NY64 477 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 EHFQ9NZC4 300 aa14.33□□□□□ -0.12
TM6SF1-201ENST00000258909 IGLV11-55A0A075B6I3 123 aa14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 LGALS9O00182 355 aa14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 UPK2O00526 184 aa14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 RBFOX2O43251 390 aaKnown RBP eCLIP14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 XRCC3O43542 346 aa14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 NQO2P16083 231 aa14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 CBLN1P23435 193 aa14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 RPS19P39019 145 aaKnown RBP14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 CBX5P45973 191 aa14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 RFX2P48378 723 aa14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 TAS2R31P59538 309 aa14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 HERV-K104P61576 105 aa14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 LINC00322Q6ZN03 302 aaPredicted RBP14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 S100A16Q96FQ6 103 aaKnown RBP14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 AIFM2Q9BRQ8 373 aa14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 TMEM140Q9NV12 185 aa14.32□□□□□ -0.12
TM6SF1-201ENST00000258909 IGLC7A0M8Q6 106 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 PMP2P02689 132 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 IFNA6P05013 189 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 CLEC3BP05452 202 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 HIST1H1BP16401 226 aaKnown RBP14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 GNRHRP30968 328 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 LAX1Q8IWV1 398 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 SAMD12Q8N8I0 201 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 DMBX1Q8NFW5 382 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 OR10W1Q8NGF6 305 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 COMMD5Q9GZQ3 224 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 TMEM213A2RRL7 107 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 RBMY1BA6NDE4 496 aaKnown RBP14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 RBMY1EA6NEQ0 496 aaKnown RBP14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 OR11H12B2RN74 326 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 RBMY1DP0C7P1 496 aaKnown RBP14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 KLK9Q2XQG4 91 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 FAM106AQ4KMX7 169 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 UBE2NLQ5JXB2 153 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 ZNF2Q9BSG1 426 aaPredicted RBP14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 HIPK2Q9H2X6 1198 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 SRD5A3Q9H8P0 318 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 TECRQ9NZ01 308 aaKnown RBP14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 MLXQ9UH92 298 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 KLK9Q9UKQ9 250 aa14.31□□□□□ -0.12
TM6SF1-201ENST00000258909 IGHV3-35A0A0C4DH35 117 aa14.3□□□□□ -0.12
TM6SF1-201ENST00000258909 RLN1P04808 185 aa14.3□□□□□ -0.12
TM6SF1-201ENST00000258909 GPR183P32249 361 aa14.3□□□□□ -0.12
TM6SF1-201ENST00000258909 TAS2R20P59543 309 aa14.3□□□□□ -0.12
TM6SF1-201ENST00000258909 POU2AF1Q16633 256 aa14.3□□□□□ -0.12
TM6SF1-201ENST00000258909 TM4SF20Q53R12 229 aa14.3□□□□□ -0.12
TM6SF1-201ENST00000258909 TMEM69Q5SWH9 247 aa14.3□□□□□ -0.12
TM6SF1-201ENST00000258909 UNQ9165/PRO28630Q6UXU0 137 aa14.3□□□□□ -0.12
TM6SF1-201ENST00000258909 TMEM61Q8N0U2 210 aa14.3□□□□□ -0.12
TM6SF1-201ENST00000258909 UXS1Q8NBZ7 420 aa14.3□□□□□ -0.12
TM6SF1-201ENST00000258909 YIPF6Q96EC8 236 aa14.3□□□□□ -0.12
TM6SF1-201ENST00000258909 PLEKHA2Q9HB19 425 aa14.3□□□□□ -0.12
TM6SF1-201ENST00000258909 TRBV7-1A0A0A6YYK4 115 aa14.29□□□□□ -0.12
TM6SF1-201ENST00000258909 DHRS11Q6UWP2 260 aa14.29□□□□□ -0.12
TM6SF1-201ENST00000258909 CROCCP3Q8IVE0 287 aa14.29□□□□□ -0.12
TM6SF1-201ENST00000258909 CXorf58Q96LI9 332 aa14.29□□□□□ -0.12
TM6SF1-201ENST00000258909 LCE6AA0A183 80 aa14.28□□□□□ -0.12
TM6SF1-201ENST00000258909 TMEM127O75204 238 aa14.28□□□□□ -0.12
TM6SF1-201ENST00000258909 PGLYRP1O75594 196 aaPredicted RBP14.28□□□□□ -0.12
TM6SF1-201ENST00000258909 SCAF4O95104 1147 aaKnown RBP14.28□□□□□ -0.12
TM6SF1-201ENST00000258909 ZNF57Q68EA5 555 aaPredicted RBP14.28□□□□□ -0.12
TM6SF1-201ENST00000258909 ZNF502Q8TBZ5 544 aa14.28□□□□□ -0.12
TM6SF1-201ENST00000258909 CD300LFQ8TDQ1 290 aa14.28□□□□□ -0.12
TM6SF1-201ENST00000258909 MOB3AQ96BX8 217 aa14.28□□□□□ -0.12
TM6SF1-201ENST00000258909 QTRT1Q9BXR0 403 aaKnown RBP14.28□□□□□ -0.12
TM6SF1-201ENST00000258909 DNAH1Q9P2D7 4330 aa14.28□□□□□ -0.12
TM6SF1-201ENST00000258909 TEX50A0A1B0GTY4 177 aa14.27□□□□□ -0.12
TM6SF1-201ENST00000258909 A8MWP6 167 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms