RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ITPR1Q14643 2758 aa12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 XKRY2A2RUG3 117 aa12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 PGPEP1LA6NFU8 196 aa12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 AMBPP02760 352 aa12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 GZMBP10144 247 aa12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 S100A7P31151 101 aa12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 LYPD2Q6UXB3 125 aa12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 MRGPRGQ86SM5 289 aa12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 RCC1LQ96I51 464 aaKnown RBP12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 OR9G9P0C7N8 305 aa12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 ABHD12Q8N2K0 398 aa12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 RAB40CQ96S21 281 aa12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 SDF2L1Q9HCN8 221 aa12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 CBLN4Q9NTU7 201 aa12.09□□□□□ -0.47
TRAFD1-201ENST00000257604 IGHV3-72A0A0B4J1Y9 119 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 C15orf65H3BRN8 121 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 BPIFB3P59826 476 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 UBE2G2P60604 165 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 PMS2P11Q13670 270 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 BATFQ16520 125 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 SP5Q6BEB4 398 aaPredicted RBP12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 MRPL41Q8IXM3 137 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 RPL31P62899 125 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 CDSNQ15517 529 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 HAPLN4Q86UW8 402 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 ARL6IP6Q8N6S5 226 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 OR10A7Q8NGE5 316 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 AGMATQ9BSE5 352 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 NAV3Q8IVL0 2385 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 CST9LP1Q5W188 147 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 LHX4Q969G2 390 aa12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 SLC25A10Q9UBX3 287 aaPredicted RBP12.08□□□□□ -0.48
TRAFD1-201ENST00000257604 LRRC30A6NM36 301 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 C17orf100A8MU93 164 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 C1QTNF9BB2RNN3 333 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 C1QTNF9P0C862 333 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 ERVK-16P61578 105 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 HBG1P69891 147 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 HBG2P69892 147 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 MRPS11P82912 194 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 RELQ04864 619 aaPredicted RBP12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 CT45A1Q5HYN5 189 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 OR13D1Q8NGV5 346 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 CT45A3Q8NHU0 189 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 PRR7Q8TB68 274 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 IGFBPL1Q8WX77 278 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 IL19Q9UHD0 177 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.07□□□□□ -0.481e-6■■■□□ 16.6
TRAFD1-201ENST00000257604 SAA2-SAA4A0A096LPE2 208 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 SAA2P0DJI9 122 aaPredicted RBP12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 DUTP33316 252 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 TMPRSS3P57727 454 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 GNB2P62879 340 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 PITPNC1Q9UKF7 332 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 CBY1Q9Y3M2 126 aa12.07□□□□□ -0.48
TRAFD1-201ENST00000257604 POLQO75417 2590 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 IGLV3-9A0A075B6K5 115 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 MAP1LC3B2A6NCE7 125 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 SCGB1D1O95968 90 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 IGHV3-48P01763 117 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 TNFRSF1AP19438 455 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 TAS2R60P59551 318 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 TFF3Q07654 80 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 OR4F5Q8NH21 305 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 OR4F4Q96R69 305 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 MAP1LC3BQ9GZQ8 125 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 CISD1Q9NZ45 108 aaKnown RBP12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 OR6C3Q9NZP0 311 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 A0A1W2PRD5 423 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 A0A1W2PRF3 423 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 A0A1W2PRM7 423 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 DFFBO76075 338 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 ADH4P08319 380 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 FAM122AQ96E09 287 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 GAFA1Q96PS6 74 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 FLNCQ14315 2725 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 EPG5Q9HCE0 2579 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 FGF7P21781 194 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 OR10P1Q8NGE3 313 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 IL22RA2Q969J5 263 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 SLC39A9Q9NUM3 307 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 MSRB2Q9Y3D2 182 aa12.06□□□□□ -0.48
TRAFD1-201ENST00000257604 DUXBA0A1W2PPF3 345 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 A6NNC1 897 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 B4DEV8 164 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 E7EQL1 145 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 ENSAO43768 121 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 IGKV1D-33P01593 117 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 IGKV1-33P01594 117 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 ZNF25P17030 456 aaPredicted RBP12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 TMEM183AQ8IXX5 376 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 OR51G1Q8NGK1 321 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 LSM10Q969L4 123 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 TANC2Q9HCD6 1990 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 NPIPB11E5RHQ5 1161 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 RND2P52198 227 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 C17orf58Q2M2W7 97 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 GCSAMLQ5JQS6 135 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms