RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SCNM1Q9BWG6 230 aa5.75□□□□□ -1.49
PDGFRA-201ENST00000257290 A0A0G2JMZ2 1700 aa5.75□□□□□ -1.49
PDGFRA-201ENST00000257290 SYS1-DBNDD2H3BUS1 97 aa5.75□□□□□ -1.49
PDGFRA-201ENST00000257290 H7C1H1 209 aa5.75□□□□□ -1.49
PDGFRA-201ENST00000257290 SYNGR2O43760 224 aa5.75□□□□□ -1.49
PDGFRA-201ENST00000257290 KLK8O60259 260 aa5.75□□□□□ -1.49
PDGFRA-201ENST00000257290 C18orf32Q8TCD1 76 aa5.75□□□□□ -1.49
PDGFRA-201ENST00000257290 NT5CQ8TCD5 201 aa5.75□□□□□ -1.49
PDGFRA-201ENST00000257290 AGMATQ9BSE5 352 aa5.75□□□□□ -1.49
PDGFRA-201ENST00000257290 TRBV5-4A0A0C4DH59 114 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 FAM90A27PA6NNH2 459 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 FAM157AC9JC47 383 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 SH2D6Q7Z4S9 175 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 Q96M85 177 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 RTL8AQ9BWD3 113 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 REPIN1Q9BWE0 567 aaKnown RBP5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 SOCS1O15524 211 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 ZNF137PP52743 207 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 NPC2P61916 151 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 RPL30P62888 115 aaKnown RBP5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 RPL31P62899 125 aaKnown RBP5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 FOXI1Q12951 378 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 C3orf56Q8N813 242 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 EEF1AKMT3Q96AZ1 226 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 RCHY1Q96PM5 261 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 ZNF236Q9UL36 1845 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 H3BMG7 143 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 IGHV3-7P01780 117 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 RAE1P78406 368 aaKnown RBP5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 CCL20P78556 96 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 TAL2Q16559 108 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 DEFB134Q4QY38 66 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 TMEM207Q6UWW9 146 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 FBXL14Q8N1E6 418 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 RNF166Q96A37 237 aaPredicted RBP5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 TM4SF18Q96CE8 201 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 ZNF714Q96N38 554 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 KLHDC2Q9Y2U9 406 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 KLF13Q9Y2Y9 288 aaPredicted RBP5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 EVPLQ92817 2033 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 TMED7-TICAM2A0A0A6YYA0 188 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 SHISA3A0PJX4 238 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 NR0B2Q15466 257 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 ZXDCQ2QGD7 858 aaPredicted RBP5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 TM4SF19Q96DZ7 209 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 CACNG5Q9UF02 275 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 TRBV5-3A0A0A0MS03 114 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 KNCNA6PVL3 124 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 C5orf67F2Z3F1 127 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 UPK3AO75631 287 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 COX8AP10176 69 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 CXCL12P48061 93 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 CLDN2P57739 230 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 ZNF260Q3ZCT1 412 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 PRSS41Q7RTY9 318 aa5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 MRPS18BQ9Y676 258 aaKnown RBP5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 SIRT4Q9Y6E7 314 aaPredicted RBP5.74□□□□□ -1.49
PDGFRA-201ENST00000257290 ZNF785A8K8V0 405 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 COL8A1P27658 744 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 AGERQ15109 404 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 NABP2Q9BQ15 211 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 RTBDNQ9BSG5 229 aaPredicted RBP5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 BEX4Q9NWD9 120 aaPredicted RBP5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 LOXL2Q9Y4K0 774 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 TRAV1-1A0A0B4J248 108 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 H0YIZ8 118 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 MGST3O14880 152 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 B3GALT4O96024 378 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 ZNF542PQ5EBM4 170 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 ZNF595Q8IYB9 648 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 SP7Q8TDD2 431 aaPredicted RBP5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 SLC25A43Q8WUT9 341 aaPredicted RBP5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 PPDPFQ9H3Y8 114 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 RPRMQ9NS64 109 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 A0A1W2PS18 150 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 MT-ATP8P03928 68 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 HBBP68871 147 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 IER5LQ5T953 404 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 OSR1Q8TAX0 266 aaPredicted RBP5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 IZUMO1RA6ND01 250 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 TUSC2O75896 110 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 TAAR2Q9P1P5 351 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 MEOX1P50221 254 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 PTCRAQ6ISU1 281 aaPredicted RBP5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 APOBEC4Q8WW27 367 aaKnown RBP5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 DYNLRB1Q9NP97 96 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 PRO0628Q9UI54 55 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 RARRES3Q9UL19 164 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 ZFC3H1O60293 1989 aaKnown RBP5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 KIAA1217Q5T5P2 1943 aa5.73□□□□□ -1.49
PDGFRA-201ENST00000257290 PGPA6NDG6 321 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 UQCRQO14949 82 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 ATP5G1P05496 136 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 ATP5G3P48201 142 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 PLGLAQ15195 96 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 KHDC1LQ5JSQ8 128 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 SLC35A4Q96G79 324 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 C18orf15Q96N68 181 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 PLAC1Q9HBJ0 212 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms