RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 LINC00114Q6XXX2 140 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 ALKBH7Q9BT30 221 aaPredicted RBP7.36□□□□□ -1.23
PTCD3-201ENST00000254630 THBDP07204 575 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 TFF3Q07654 80 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 OR1P1Q8NH06 330 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 OSR1Q8TAX0 266 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-201ENST00000254630 FMC1Q96HJ9 113 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 LINC00312Q9Y6C7 94 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 A0A0G2JLM5 398 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 EFEMP2O95967 443 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 ATP5IP56385 69 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-201ENST00000254630 TBR1Q16650 682 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 C1QL2Q7Z5L3 287 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 NPCDR1Q9BY65 106 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 C7orf69Q9H7B7 122 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 AKIRIN1Q9H9L7 192 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-201ENST00000254630 TRBV9A0A0B4J1U6 114 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 C17orf100A8MU93 164 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 C1QL1O75973 258 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 CSRP1P21291 193 aaKnown RBP7.35□□□□□ -1.23
PTCD3-201ENST00000254630 ASIPP42127 132 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 RND3P61587 244 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 RPL24P83731 157 aaKnown RBP7.35□□□□□ -1.23
PTCD3-201ENST00000254630 LHFPL5Q8TAF8 219 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 RNASE1P07998 156 aaKnown RBP7.35□□□□□ -1.23
PTCD3-201ENST00000254630 IFITM3Q01628 133 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 SPACA3Q8IXA5 215 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 ZIC4Q8N9L1 334 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 DANCRP0C864 163 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 NUTF2P61970 127 aaKnown RBP7.35□□□□□ -1.23
PTCD3-201ENST00000254630 MGAMO43451 1857 aa7.35□□□□□ -1.23
PTCD3-201ENST00000254630 CLDND2Q8NHS1 167 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 SGK494Q96LW2 274 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 A0A0G2JK05 382 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 PINLYPA6NC86 204 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 LEPP41159 167 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 SMUG1Q53HV7 270 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 C17orf98A8MV24 154 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 EIF3GO75821 320 aaKnown RBP eCLIP7.34□□□□□ -1.23
PTCD3-201ENST00000254630 CEACAM4O75871 244 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 TRGC2P03986 189 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 CENPWQ5EE01 88 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 FLVCR1-AS1Q8TAF5 88 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 C7orf71A4D174 169 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 PRSS2P07478 247 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 IGFBP2P18065 325 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 GPR183P32249 361 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 CIRBPQ14011 172 aaKnown RBP7.34□□□□□ -1.23
PTCD3-201ENST00000254630 GGACTQ9BVM4 153 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 IGHV1-18A0A0C4DH31 117 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 H2BFSP57053 126 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 PSG7Q13046 419 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 ICAM4Q14773 271 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 MEIG1Q5JSS6 88 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 HIST1H4GQ99525 98 aa7.34□□□□□ -1.23
PTCD3-201ENST00000254630 LOC102723996A0A087X1L8 192 aa7.34□□□□□ -1.24
PTCD3-201ENST00000254630 RBFOX2O43251 390 aaKnown RBP eCLIP7.34□□□□□ -1.243e-7■□□□□ 9.8
PTCD3-201ENST00000254630 SAPCD1Q5SSQ6 148 aa7.34□□□□□ -1.24
PTCD3-201ENST00000254630 PARLQ9H300 379 aa7.34□□□□□ -1.24
PTCD3-201ENST00000254630 IGHV3-49A0A0A0MS15 119 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 A0A0B4J293 547 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 IGHV3-35A0A0C4DH35 117 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 SIGLEC5O15389 551 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 TAS2R60P59551 318 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 LY6DQ14210 128 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 PSMG3Q9BT73 122 aaPredicted RBP7.33□□□□□ -1.24
PTCD3-201ENST00000254630 MRPS16Q9Y3D3 137 aaKnown RBP7.33□□□□□ -1.24
PTCD3-201ENST00000254630 IGLV3-12A0A075B6K2 115 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 NPIPB9F8W1W9 429 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 AGAP20933 346 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 MBNL2Q5VZF2 373 aaKnown RBP7.33□□□□□ -1.24
PTCD3-201ENST00000254630 ARL6IP6Q8N6S5 226 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 LYZL4Q96KX0 146 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 KLK15Q9H2R5 256 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 SDF2L1Q9HCN8 221 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 THSD7BQ9C0I4 1608 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 SAA2-SAA4A0A096LPE2 208 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 C9JCJ5 164 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 SAA2P0DJI9 122 aaPredicted RBP7.33□□□□□ -1.24
PTCD3-201ENST00000254630 CD59P13987 128 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 ZFP36L1Q07352 338 aaKnown RBP7.33□□□□□ -1.24
PTCD3-201ENST00000254630 OR4D5Q8NGN0 318 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 OR10S1Q8NGN2 331 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 HIST1H2BAQ96A08 127 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 KIR2DL4Q99706 377 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 RRHO14718 337 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 SRIP30626 198 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 TCF24Q7RTU0 167 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 OR10AG1Q8NH19 301 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 GEMIN7Q9H840 131 aaKnown RBP7.33□□□□□ -1.24
PTCD3-201ENST00000254630 TRBV20OR9-2A0A075B6H5 130 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 IGHV3OR16-13A0A075B7E8 117 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 IGHV3-74A0A0B4J1X5 117 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 PROB1E7EW31 1015 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 LEPROTL1O95214 131 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 TGFAP01135 160 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 COX6CP09669 75 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 PAX1P15863 534 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 HBBP68871 147 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 RNASEH2CQ8TDP1 164 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms