RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 SPOCK3Q9BQ16 436 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 STRADBQ9C0K7 418 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 ZNRD1Q9P1U0 126 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 SELENOKQ9Y6D0 94 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 RELNP78509 3460 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 KRTCAP3Q53RY4 240 aa9.97□□□□□ -0.81
USHBP1-201ENST00000252597 GOLT1BQ9Y3E0 138 aa9.97□□□□□ -0.81
USHBP1-201ENST00000252597 TLN1Q9Y490 2541 aaKnown RBP9.97□□□□□ -0.81
USHBP1-201ENST00000252597 OOEPA6NGQ2 149 aa9.97□□□□□ -0.81
USHBP1-201ENST00000252597 SMPD2O60906 423 aa9.97□□□□□ -0.81
USHBP1-201ENST00000252597 FOXF2Q12947 444 aa9.97□□□□□ -0.81
USHBP1-201ENST00000252597 YTHDF2Q9Y5A9 579 aaKnown RBP9.97□□□□□ -0.81
USHBP1-201ENST00000252597 ANKRD11Q6UB99 2663 aaPredicted RBP9.97□□□□□ -0.81
USHBP1-201ENST00000252597 PIGBOS1A0A0B4J2F0 54 aa9.97□□□□□ -0.81
USHBP1-201ENST00000252597 SRP14P37108 136 aaKnown RBP9.97□□□□□ -0.81
USHBP1-201ENST00000252597 ATP6V1FQ16864 119 aa9.97□□□□□ -0.81
USHBP1-201ENST00000252597 TGIF2LYQ8IUE0 185 aa9.97□□□□□ -0.81
USHBP1-201ENST00000252597 COQ2Q96H96 371 aa9.97□□□□□ -0.81
USHBP1-201ENST00000252597 KALRNO60229 2985 aa9.96□□□□□ -0.81
USHBP1-201ENST00000252597 C15orf62A8K5M9 175 aa9.96□□□□□ -0.81
USHBP1-201ENST00000252597 H3BTX0 84 aa9.96□□□□□ -0.81
USHBP1-201ENST00000252597 TDGF1P13385 188 aa9.96□□□□□ -0.81
USHBP1-201ENST00000252597 REG1BP48304 166 aa9.96□□□□□ -0.81
USHBP1-201ENST00000252597 UTF1Q5T230 341 aa9.96□□□□□ -0.81
USHBP1-201ENST00000252597 Q6ZS49 121 aa9.96□□□□□ -0.81
USHBP1-201ENST00000252597 MIR17HGQ75NE6 70 aa9.96□□□□□ -0.81
USHBP1-201ENST00000252597 ZCCHC14Q8WYQ9 949 aaKnown RBP9.96□□□□□ -0.81
USHBP1-201ENST00000252597 TAAR6Q96RI8 345 aa9.96□□□□□ -0.81
USHBP1-201ENST00000252597 PDE6DO43924 150 aa9.96□□□□□ -0.82
USHBP1-201ENST00000252597 IGFBP2P18065 325 aa9.96□□□□□ -0.82
USHBP1-201ENST00000252597 GNG4P50150 75 aa9.96□□□□□ -0.82
USHBP1-201ENST00000252597 Q6ZWC4 215 aa9.96□□□□□ -0.82
USHBP1-201ENST00000252597 PKIBQ9C010 78 aa9.96□□□□□ -0.82
USHBP1-201ENST00000252597 DIRC3C9JPN6 131 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 KLRC4-KLRK1H3BQV0 150 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 RPLP1P05386 114 aaKnown RBP9.95□□□□□ -0.82
USHBP1-201ENST00000252597 CD46P15529 392 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 TCTAP57738 103 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 MMDQ15546 238 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 TREML4Q6UXN2 200 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 MMD2Q8IY49 270 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 DIRC2Q96SL1 478 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 ELOVL5Q9NYP7 299 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 SPTBN4Q9H254 2564 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 ZZEF1O43149 2961 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 IGHV3-21A0A0B4J1V1 117 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 GGCTO75223 188 aaKnown RBP9.95□□□□□ -0.82
USHBP1-201ENST00000252597 ZNF83P51522 516 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 SOX8P57073 446 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 RAB31Q13636 194 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 RNFT1Q5M7Z0 435 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 LCN12Q6JVE5 192 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 Q6ZN92 141 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 ST6GALNAC6Q969X2 333 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 LINC00479Q96M42 142 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 TMEM140Q9NV12 185 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 TACC2O95359 2948 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.95□□□□□ -0.82
USHBP1-201ENST00000252597 TNFSF15O95150 251 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 SRIP30626 198 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 HINT1P49773 126 aaPredicted RBP9.95□□□□□ -0.82
USHBP1-201ENST00000252597 BRWD1-AS2P59051 145 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 PRB3Q04118 309 aaPredicted RBP9.95□□□□□ -0.82
USHBP1-201ENST00000252597 TMEM183BQ1AE95 376 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 ARSJQ5FYB0 599 aaPredicted RBP9.95□□□□□ -0.82
USHBP1-201ENST00000252597 Q8IYB0 196 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 STPG3Q8N7X2 389 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 STARD4Q96DR4 205 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 TMEM106BQ9NUM4 274 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 ZNF586Q9NXT0 402 aa9.95□□□□□ -0.82
USHBP1-201ENST00000252597 MKRN2OSH3BPM6 223 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 MLNRO43193 412 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 RNPS1Q15287 305 aaKnown RBP9.94□□□□□ -0.82
USHBP1-201ENST00000252597 RNF151Q2KHN1 245 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 C11orf42Q8N5U0 333 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 BCL2L2Q92843 193 aaPredicted RBP9.94□□□□□ -0.82
USHBP1-201ENST00000252597 MGST2Q99735 147 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 TMEM208Q9BTX3 173 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 LOC102724200A0A096LPH7 203 aaPredicted RBP9.94□□□□□ -0.82
USHBP1-201ENST00000252597 C9orf172C9J069 976 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 SP1P08047 785 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 IL6RP08887 468 aaPredicted RBP9.94□□□□□ -0.82
USHBP1-201ENST00000252597 COX5BP10606 129 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 PRDX2P32119 198 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 GPR6P46095 362 aaPredicted RBP9.94□□□□□ -0.82
USHBP1-201ENST00000252597 KRTAP27-1Q3LI81 207 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 TIGITQ495A1 244 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 CENPWQ5EE01 88 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 VWA1Q6PCB0 445 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 MOGAT3Q86VF5 341 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 TMEM45BQ96B21 275 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 OTOGLQ3ZCN5 2332 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 HELTA6NFD8 242 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 IGHV1-2P23083 117 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 GCHFRP30047 84 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 LINC00596Q86U02 117 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 Q8NFD4 153 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 SH3BGRL2Q9UJC5 107 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 TCF19Q9Y242 345 aa9.94□□□□□ -0.82
USHBP1-201ENST00000252597 TBL2Q9Y4P3 447 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms