RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 OR11H12B2RN74 326 aa7.72□□□□□ -1.17
VPS50-201ENST00000251739 JTBO76095 146 aa7.72□□□□□ -1.17
VPS50-201ENST00000251739 OR2C1O95371 312 aa7.72□□□□□ -1.17
VPS50-201ENST00000251739 CBLN1P23435 193 aa7.72□□□□□ -1.17
VPS50-201ENST00000251739 PSMB6P28072 239 aa7.72□□□□□ -1.17
VPS50-201ENST00000251739 MSMO1Q15800 293 aa7.72□□□□□ -1.17
VPS50-201ENST00000251739 UBE2UQ5VVX9 321 aa7.72□□□□□ -1.17
VPS50-201ENST00000251739 DYNLRB2Q8TF09 96 aa7.72□□□□□ -1.17
VPS50-201ENST00000251739 TCTEX1D2Q8WW35 142 aa7.72□□□□□ -1.17
VPS50-201ENST00000251739 FYTTD1Q96QD9 318 aaKnown RBP7.72□□□□□ -1.17
VPS50-201ENST00000251739 MLXQ9UH92 298 aa7.72□□□□□ -1.17
VPS50-201ENST00000251739 ANXA10Q9UJ72 324 aa7.72□□□□□ -1.17
VPS50-201ENST00000251739 FBXL7Q9UJT9 491 aa7.72□□□□□ -1.17
VPS50-201ENST00000251739 SMIM30A4D0T7 59 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 J3QRK9 145 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 RBFOX2O43251 390 aaKnown RBP eCLIP7.71□□□□□ -1.18
VPS50-201ENST00000251739 SCGNO76038 276 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 ARL3P36405 182 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 GABARAPL2P60520 117 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 RPL8P62917 257 aaKnown RBP7.71□□□□□ -1.18
VPS50-201ENST00000251739 POU2AF1Q16633 256 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 TIMM50Q3ZCQ8 353 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 OR4A47Q6IF82 309 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 IZUMO2Q6UXV1 221 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 ZNF66Q6ZN08 573 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 IQCF2Q8IXL9 164 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 LGALS14Q8TCE9 139 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 GPHA2Q96T91 129 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 DCUN1D5Q9BTE7 237 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 ST6GALNAC5Q9BVH7 336 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 TXNL4BQ9NX01 149 aaKnown RBP7.71□□□□□ -1.18
VPS50-201ENST00000251739 BET1LQ9NYM9 111 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 TAS2R8Q9NYW2 309 aa7.71□□□□□ -1.18
VPS50-201ENST00000251739 DNAH10Q8IVF4 4471 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 IGLC7A0M8Q6 106 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 MFSD2BA6NFX1 497 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 MRPS14O60783 128 aaKnown RBP7.7□□□□□ -1.18
VPS50-201ENST00000251739 FGF2P09038 288 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 C8orf88P0DMB2 117 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 MYOD1P15172 320 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 HIST1H1BP16401 226 aaKnown RBP7.7□□□□□ -1.18
VPS50-201ENST00000251739 HLA-GP17693 338 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 HSPA13P48723 471 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 OR2B8PP59922 312 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 GUCA2BQ16661 112 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 ZNF773Q6PK81 442 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 CLEC19AQ6UXS0 136 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 SLC16A13Q7RTY0 426 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 TPRA1Q86W33 373 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 SLC25A38Q96DW6 304 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 CNBD2Q96M20 576 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 ARPC5LQ9BPX5 153 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 OVOL2Q9BRP0 275 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 RHBDL2Q9NX52 303 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 SPATA2Q9UM82 520 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 S4R3C0 116 aa7.7□□□□□ -1.18
VPS50-201ENST00000251739 DHFRP00374 187 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 HRASP01112 189 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 IGHV3-23P01764 117 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 SCAND1P57086 179 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 GNG2P59768 71 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 ZNF57Q68EA5 555 aaPredicted RBP7.69□□□□□ -1.18
VPS50-201ENST00000251739 SFXN4Q6P4A7 337 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 UNQ9165/PRO28630Q6UXU0 137 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 UXS1Q8NBZ7 420 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 OR4A5Q8NH83 315 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 ZNF502Q8TBZ5 544 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 MARC2Q969Z3 335 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 EEF1AKMT3Q96AZ1 226 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 TSC22D3Q99576 134 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 GGTLC1Q9BX51 225 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 CCL28Q9NRJ3 127 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 DAPK2Q9UIK4 370 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 PAIP2BQ9ULR5 123 aaKnown RBP7.69□□□□□ -1.18
VPS50-201ENST00000251739 SELENOKQ9Y6D0 94 aa7.69□□□□□ -1.18
VPS50-201ENST00000251739 DNAH6Q9C0G6 4158 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 TRBV7-1A0A0A6YYK4 115 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 TRAV25A0A0B4J276 109 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 DPPA5A6NC42 116 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 PPYP01298 95 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 REG1AP05451 166 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 PTHLHP12272 177 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 ELLP55199 621 aaPredicted RBP7.68□□□□□ -1.18
VPS50-201ENST00000251739 TAS2R31P59538 309 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 FAM106AQ4KMX7 169 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 TM4SF20Q53R12 229 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 BTNL8Q6UX41 500 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 SSX9Q7RTT3 188 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 HOGA1Q86XE5 327 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 SPAG16Q8N0X2 631 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 SPARTQ8N0X7 666 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 GVQW1Q8N7I0 195 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 ZBTB34Q8NCN2 500 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 BEST4Q8NFU0 473 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 OR52B4Q8NGK2 314 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 OR13F1Q8NGS4 319 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 SECTM1Q8WVN6 248 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 LINC00476Q8WZB0 136 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 CXorf58Q96LI9 332 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 SRSF8Q9BRL6 282 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms