RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 AP5S1Q9NUS5 200 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 UTRNP46939 3433 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 CYP2G1PQ6ZSU1 146 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 VPS25Q9BRG1 176 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 SLC25A33Q9BSK2 321 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 IGKV1D-8A0A087WSZ0 117 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 ELOA3CA0A087WX78 387 aaPredicted RBP3.93□□□□□ -1.78
RAP1B-201ENST00000250559 ZNF503-AS2A6NEH8 195 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 NAT1P18440 290 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 HINT1P49773 126 aaPredicted RBP3.93□□□□□ -1.78
RAP1B-201ENST00000250559 DHRS11Q6UWP2 260 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 SFRP2Q96HF1 295 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 TMEM106BQ9NUM4 274 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 MLNRO43193 412 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 RBFOX2O43251 390 aaKnown RBP eCLIP3.93□□□□□ -1.78
RAP1B-201ENST00000250559 SAP30O75446 220 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 OTX1P32242 354 aaPredicted RBP3.93□□□□□ -1.78
RAP1B-201ENST00000250559 ZNF329Q86UD4 541 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 BEND2Q8NDZ0 799 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 SRSF12Q8WXF0 261 aaKnown RBP3.93□□□□□ -1.78
RAP1B-201ENST00000250559 TRAV40A0A0B4J280 105 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 CRXO43186 299 aaPredicted RBP3.93□□□□□ -1.78
RAP1B-201ENST00000250559 AMY1AP04745 511 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 MORN2Q502X0 79 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 CD177Q8N6Q3 437 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 OR4C5Q8NGB2 326 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 OR8A1Q8NGG7 326 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 PNRC2Q9NPJ4 139 aaKnown RBP3.93□□□□□ -1.78
RAP1B-201ENST00000250559 HSPB7Q9UBY9 170 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 ZNF324BQ6AW86 544 aaPredicted RBP3.93□□□□□ -1.78
RAP1B-201ENST00000250559 STXBP6Q8NFX7 210 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 FOXA2Q9Y261 457 aaPredicted RBP3.93□□□□□ -1.78
RAP1B-201ENST00000250559 PPOXP50336 477 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 SGMS2Q8NHU3 365 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 SPOCK3Q9BQ16 436 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 ELOVL5Q9NYP7 299 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 GRIFINA4D1Z8 144 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 FOXI3A8MTJ6 420 aaPredicted RBP3.93□□□□□ -1.78
RAP1B-201ENST00000250559 HIST3H3Q16695 136 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 C17orf82Q86X59 251 aaPredicted RBP3.93□□□□□ -1.78
RAP1B-201ENST00000250559 MRPL20Q9BYC9 149 aaKnown RBP3.93□□□□□ -1.78
RAP1B-201ENST00000250559 COL4A3Q01955 1670 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 LOC102723996A0A087X1L8 192 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 CA11O75493 328 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 KLRD1Q13241 179 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 TCTEX1D1Q8N7M0 179 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 LINC00470Q9BZP3 86 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 TEX50A0A1B0GTY4 177 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 MYOD1P15172 320 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 HSPE1P61604 102 aaKnown RBP3.93□□□□□ -1.78
RAP1B-201ENST00000250559 OR4C13Q8NGP0 309 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 MIOXQ9UGB7 285 aa3.93□□□□□ -1.78
RAP1B-201ENST00000250559 ZNFX1Q9P2E3 1918 aaKnown RBP3.92□□□□□ -1.78
RAP1B-201ENST00000250559 IL6RP08887 468 aaPredicted RBP3.92□□□□□ -1.78
RAP1B-201ENST00000250559 IQCJQ1A5X6 159 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 CLEC19AQ6UXS0 136 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 BIVMQ86UB2 503 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 FAM90A1Q86YD7 464 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 TRBV6-7A0A0A0MS04 114 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 HOXA6P31267 233 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 LRRC75BQ2VPJ9 315 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 ZNF497Q6ZNH5 498 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 OR10J6PQ8NGY7 276 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 IFT22Q9H7X7 185 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 ZNRD1Q9P1U0 126 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 FOXD3Q9UJU5 478 aaPredicted RBP3.92□□□□□ -1.78
RAP1B-201ENST00000250559 ANOS1P23352 680 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 SUPT4H1P63272 117 aaKnown RBP3.92□□□□□ -1.78
RAP1B-201ENST00000250559 SPATA45Q537H7 98 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 DIRC3C9JPN6 131 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 H3BVH4 76 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 HIST1H1EP10412 219 aaKnown RBP3.92□□□□□ -1.78
RAP1B-201ENST00000250559 DMRTC2Q8IXT2 367 aaPredicted RBP3.92□□□□□ -1.78
RAP1B-201ENST00000250559 HIST1H2BAQ96A08 127 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 TUBD1Q9UJT1 453 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 TRAV5A0A0B4J249 113 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 H0YIZ8 118 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 FOXH1O75593 365 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 HOXD4P09016 255 aaPredicted RBP3.92□□□□□ -1.78
RAP1B-201ENST00000250559 C8orf88P0DMB2 117 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 FOXA3P55318 350 aaPredicted RBP3.92□□□□□ -1.78
RAP1B-201ENST00000250559 TIMM23BQ5SRD1 257 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 ATRAIDQ6UW56 229 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 GOLT1AQ6ZVE7 132 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 MYOZ3Q8TDC0 251 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 CITO14578 2027 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 TMEM177Q53S58 311 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 WNT10AQ9GZT5 417 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 DNAJC4Q9NNZ3 241 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 TMEM189A5PLL7 270 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 B9A039 149 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 ZNF25P17030 456 aaPredicted RBP3.92□□□□□ -1.78
RAP1B-201ENST00000250559 BTF3P20290 206 aaKnown RBP3.92□□□□□ -1.78
RAP1B-201ENST00000250559 GPR183P32249 361 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 MEF2BQ02080 365 aaPredicted RBP3.92□□□□□ -1.78
RAP1B-201ENST00000250559 TMEM78Q5T7P6 136 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 C20orf204Q6ZNR8 217 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 STPG3Q8N7X2 389 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 OR4X2Q8NGF9 303 aa3.92□□□□□ -1.78
RAP1B-201ENST00000250559 C18orf12Q96KH6 178 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms