RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 NRGNQ92686 78 aa10.84□□□□□ -0.67
NUP85-201ENST00000245544 MARVELD3Q96A59 401 aa10.84□□□□□ -0.67
NUP85-201ENST00000245544 GNPNAT1Q96EK6 184 aaPredicted RBP10.84□□□□□ -0.67
NUP85-201ENST00000245544 CCL19Q99731 98 aa10.84□□□□□ -0.67
NUP85-201ENST00000245544 PCGF1Q9BSM1 259 aa10.84□□□□□ -0.67
NUP85-201ENST00000245544 WDR61Q9GZS3 305 aaKnown RBP10.84□□□□□ -0.67
NUP85-201ENST00000245544 MS4A7Q9GZW8 240 aaPredicted RBP10.84□□□□□ -0.67
NUP85-201ENST00000245544 VSIRQ9H7M9 311 aa10.84□□□□□ -0.67
NUP85-201ENST00000245544 TPSG1Q9NRR2 321 aa10.84□□□□□ -0.67
NUP85-201ENST00000245544 FAM96BQ9Y3D0 163 aa10.84□□□□□ -0.67
NUP85-201ENST00000245544 IGHV1-3A0A0C4DH29 117 aa10.83□□□□□ -0.68
NUP85-201ENST00000245544 A1L4Q6 167 aa10.83□□□□□ -0.68
NUP85-201ENST00000245544 LY6LH3BQJ8 138 aa10.83□□□□□ -0.68
NUP85-201ENST00000245544 IL3RAP26951 378 aa10.83□□□□□ -0.68
NUP85-201ENST00000245544 CNTFRP26992 372 aa10.83□□□□□ -0.68
NUP85-201ENST00000245544 LMO4P61968 165 aa10.83□□□□□ -0.68
NUP85-201ENST00000245544 CLDND2Q8NHS1 167 aa10.83□□□□□ -0.68
NUP85-201ENST00000245544 HIPK2Q9H2X6 1198 aa10.83□□□□□ -0.68
NUP85-201ENST00000245544 PRNDQ9UKY0 176 aa10.83□□□□□ -0.68
NUP85-201ENST00000245544 PTPN13Q12923 2485 aa10.83□□□□□ -0.68
NUP85-201ENST00000245544 TENM4Q6N022 2769 aa10.83□□□□□ -0.68
NUP85-201ENST00000245544 RAB19A4D1S5 217 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 M0R1W7 72 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 SCO1O75880 301 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 ZP3P21754 424 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 F2RL1P55085 397 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 MOB3BQ86TA1 216 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 OR10W1Q8NGF6 305 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 SCGB1C1Q8TD33 95 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 TAF15Q92804 592 aaKnown RBP eCLIP10.82□□□□□ -0.68
NUP85-201ENST00000245544 INSIG2Q9Y5U4 225 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 ABCA12Q86UK0 2595 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 PRSS46E5RG02 174 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 SLC25A17O43808 307 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 RAB5CP51148 216 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 PAX2Q02962 417 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 MRGPRG-AS1Q2M3A8 158 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 LHFPL4Q7Z7J7 247 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 UQCC1Q9NVA1 299 aa10.82□□□□□ -0.68
NUP85-201ENST00000245544 TRIM77I1YAP6 450 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 OR8U8P0C7N1 319 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 PRTN3P24158 256 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 MC5RP33032 325 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 CCL20P78556 96 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 PRCDQ00LT1 54 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 C10orf55Q5SWW7 151 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 IL34Q6ZMJ4 242 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 ETV3LQ6ZN32 361 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 VMO1Q7Z5L0 202 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 OR11H6Q8NGC7 330 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 RPEQ96AT9 228 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 PINX1Q96BK5 328 aaKnown RBP10.81□□□□□ -0.68
NUP85-201ENST00000245544 NARS2Q96I59 477 aaKnown RBP10.81□□□□□ -0.68
NUP85-201ENST00000245544 CLCC1Q96S66 551 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 TMEM147Q9BVK8 224 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 ZNF430Q9H8G1 570 aaPredicted RBP10.81□□□□□ -0.68
NUP85-201ENST00000245544 A0A1W2PPI3 338 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 UMAD1C9J7I0 102 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 C9JQL5 133 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 EIF3GO75821 320 aaKnown RBP eCLIP10.81□□□□□ -0.68
NUP85-201ENST00000245544 CA2P00918 260 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 RAB13P51153 203 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 RPL8P62917 257 aaKnown RBP10.81□□□□□ -0.68
NUP85-201ENST00000245544 ATP6V1FQ16864 119 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 VWC2Q2TAL6 325 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 AIFM2Q9BRQ8 373 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 ZNF257Q9Y2Q1 563 aa10.81□□□□□ -0.68
NUP85-201ENST00000245544 ANKRD17O75179 2603 aaKnown RBP10.8□□□□□ -0.68
NUP85-201ENST00000245544 A0A1B0GW64 132 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 CGB1A6NKQ9 187 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 ODF3BA8MYP8 253 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 KRBOX1C9JBD0 128 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 GOSR1O95249 250 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 TSPAN15O95858 294 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 MDKP21741 143 aaPredicted RBP10.8□□□□□ -0.68
NUP85-201ENST00000245544 FBLN7Q53RD9 439 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 AKR1C8PQ5T2L2 129 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 TPTE2P1Q5T6R2 138 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 SPSB3Q6PJ21 355 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 TMEM167AQ8TBQ9 72 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 C17orf50Q8WW18 174 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 PARD6GQ9BYG4 376 aaPredicted RBP10.8□□□□□ -0.68
NUP85-201ENST00000245544 PLEKHA3Q9HB20 300 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 LPAR2Q9HBW0 351 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 RPRMQ9NS64 109 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 HILPDAQ9Y5L2 63 aa10.8□□□□□ -0.68
NUP85-201ENST00000245544 RNASEK-C17orf49H0YIS7 233 aa10.79□□□□□ -0.68
NUP85-201ENST00000245544 IFNA4P05014 189 aa10.79□□□□□ -0.68
NUP85-201ENST00000245544 ADCYAP1P18509 176 aa10.79□□□□□ -0.68
NUP85-201ENST00000245544 FGF7P21781 194 aa10.79□□□□□ -0.68
NUP85-201ENST00000245544 SNCAP37840 140 aa10.79□□□□□ -0.68
NUP85-201ENST00000245544 PDLIM4P50479 330 aa10.79□□□□□ -0.68
NUP85-201ENST00000245544 ELLP55199 621 aaPredicted RBP10.79□□□□□ -0.68
NUP85-201ENST00000245544 UQCC3Q6UW78 93 aa10.79□□□□□ -0.68
NUP85-201ENST00000245544 SSX7Q7RTT5 188 aa10.79□□□□□ -0.68
NUP85-201ENST00000245544 SLC24A4Q8NFF2 622 aa10.79□□□□□ -0.68
NUP85-201ENST00000245544 PSMG3Q9BT73 122 aaPredicted RBP10.79□□□□□ -0.68
NUP85-201ENST00000245544 SCRT1Q9BWW7 348 aa10.79□□□□□ -0.68
NUP85-201ENST00000245544 ENY2Q9NPA8 101 aa10.79□□□□□ -0.68
NUP85-201ENST00000245544 NDUFA4L2Q9NRX3 87 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms