RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 RPEQ96AT9 228 aa12.5□□□□□ -0.41
RAB38-201ENST00000243662 NARS2Q96I59 477 aaKnown RBP12.5□□□□□ -0.41
RAB38-201ENST00000243662 VPREB3Q9UKI3 123 aa12.5□□□□□ -0.41
RAB38-201ENST00000243662 STRAPQ9Y3F4 350 aaKnown RBP12.5□□□□□ -0.41
RAB38-201ENST00000243662 A0A1B0GU03 582 aa12.49□□□□□ -0.41
RAB38-201ENST00000243662 HSPA12AO43301 675 aa12.49□□□□□ -0.41
RAB38-201ENST00000243662 RAB7AP51149 207 aa12.49□□□□□ -0.41
RAB38-201ENST00000243662 RAB13P51153 203 aa12.49□□□□□ -0.41
RAB38-201ENST00000243662 ID3Q02535 119 aa12.49□□□□□ -0.41
RAB38-201ENST00000243662 HABP2Q14520 560 aaPredicted RBP12.49□□□□□ -0.41
RAB38-201ENST00000243662 CCDC144NLQ6NUI1 221 aa12.49□□□□□ -0.41
RAB38-201ENST00000243662 FAM219AQ8IW50 185 aa12.49□□□□□ -0.41
RAB38-201ENST00000243662 SVBPQ8N300 66 aa12.49□□□□□ -0.41
RAB38-201ENST00000243662 EDARADDQ8WWZ3 215 aa12.49□□□□□ -0.41
RAB38-201ENST00000243662 CFHR4Q92496 578 aa12.49□□□□□ -0.41
RAB38-201ENST00000243662 LYRM2Q9NU23 88 aaPredicted RBP12.49□□□□□ -0.41
RAB38-201ENST00000243662 FAM90A9PA6NNJ1 464 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 RNF212BA8MTL3 300 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 ST8SIA5O15466 376 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 SERPINE2P07093 398 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 SPP1P10451 314 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 IL3RAP26951 378 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 LPAR6P43657 344 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 VAMP2P63027 116 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 BAXQ07812 192 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 ZNF266Q14584 549 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 MSMO1Q15800 293 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 LYG1Q8N1E2 194 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 LSM10Q969L4 123 aaKnown RBP12.48□□□□□ -0.41
RAB38-201ENST00000243662 ZNF251Q9BRH9 671 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 SEC11CQ9BY50 192 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 TNFRSF19Q9NS68 423 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 TCF19Q9Y242 345 aa12.48□□□□□ -0.41
RAB38-201ENST00000243662 IGHV1-3A0A0C4DH29 117 aa12.47□□□□□ -0.41
RAB38-201ENST00000243662 BTBD17A6NE02 478 aa12.47□□□□□ -0.41
RAB38-201ENST00000243662 PITX3O75364 302 aa12.47□□□□□ -0.41
RAB38-201ENST00000243662 DEFA5Q01523 94 aa12.47□□□□□ -0.41
RAB38-201ENST00000243662 EWSR1Q01844 656 aaKnown RBP eCLIP12.47□□□□□ -0.41
RAB38-201ENST00000243662 ZNF833PQ6ZTB9 187 aa12.47□□□□□ -0.41
RAB38-201ENST00000243662 ZBTB34Q8NCN2 500 aa12.47□□□□□ -0.41
RAB38-201ENST00000243662 TSNAXQ99598 290 aaKnown RBP12.47□□□□□ -0.41
RAB38-201ENST00000243662 SMIM3Q9BZL3 60 aa12.47□□□□□ -0.41
RAB38-201ENST00000243662 NKX6-2Q9C056 277 aaPredicted RBP12.47□□□□□ -0.41
RAB38-201ENST00000243662 HRH4Q9H3N8 390 aa12.47□□□□□ -0.41
RAB38-201ENST00000243662 LIN7CQ9NUP9 197 aaKnown RBP12.47□□□□□ -0.41
RAB38-201ENST00000243662 SAA2-SAA4A0A096LPE2 208 aa12.46□□□□□ -0.41
RAB38-201ENST00000243662 A6NDX4 124 aa12.46□□□□□ -0.41
RAB38-201ENST00000243662 TIMM23O14925 209 aa12.46□□□□□ -0.41
RAB38-201ENST00000243662 PROP1O75360 226 aa12.46□□□□□ -0.41
RAB38-201ENST00000243662 FBXO24O75426 580 aa12.46□□□□□ -0.41
RAB38-201ENST00000243662 SAA2P0DJI9 122 aaPredicted RBP12.46□□□□□ -0.41
RAB38-201ENST00000243662 REG1BP48304 166 aa12.46□□□□□ -0.41
RAB38-201ENST00000243662 RPL15P61313 204 aaKnown RBP12.46□□□□□ -0.41
RAB38-201ENST00000243662 FBLN7Q53RD9 439 aa12.46□□□□□ -0.41
RAB38-201ENST00000243662 FAM71F2Q6NXP2 309 aa12.46□□□□□ -0.41
RAB38-201ENST00000243662 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.46□□□□□ -0.41
RAB38-201ENST00000243662 WFDC1Q9HC57 220 aa12.46□□□□□ -0.41
RAB38-201ENST00000243662 TREM1Q9NP99 234 aa12.46□□□□□ -0.41
RAB38-201ENST00000243662 UQCC1Q9NVA1 299 aa12.46□□□□□ -0.41
RAB38-201ENST00000243662 LOC105371267A0A1B0GV96 52 aa12.46□□□□□ -0.42
RAB38-201ENST00000243662 FAM181BA6NEQ2 426 aa12.46□□□□□ -0.42
RAB38-201ENST00000243662 RAB29O14966 203 aa12.46□□□□□ -0.42
RAB38-201ENST00000243662 TXNL1O43396 289 aa12.46□□□□□ -0.42
RAB38-201ENST00000243662 CD5P06127 495 aa12.46□□□□□ -0.42
RAB38-201ENST00000243662 BRS3P32247 399 aa12.46□□□□□ -0.42
RAB38-201ENST00000243662 ARHGDIBP52566 201 aa12.46□□□□□ -0.42
RAB38-201ENST00000243662 LY6EQ16553 131 aa12.46□□□□□ -0.42
RAB38-201ENST00000243662 THNSL2Q86YJ6 484 aa12.46□□□□□ -0.42
RAB38-201ENST00000243662 TGIF2LXQ8IUE1 241 aa12.46□□□□□ -0.42
RAB38-201ENST00000243662 DRAM1Q8N682 238 aa12.46□□□□□ -0.42
RAB38-201ENST00000243662 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.46□□□□□ -0.42
RAB38-201ENST00000243662 RAB40CQ96S21 281 aa12.46□□□□□ -0.42
RAB38-201ENST00000243662 UMAD1C9J7I0 102 aa12.45□□□□□ -0.42
RAB38-201ENST00000243662 F8W036 122 aa12.45□□□□□ -0.42
RAB38-201ENST00000243662 WRBO00258 174 aa12.45□□□□□ -0.42
RAB38-201ENST00000243662 CHST1O43916 411 aa12.45□□□□□ -0.42
RAB38-201ENST00000243662 SNAPINO95295 136 aa12.45□□□□□ -0.42
RAB38-201ENST00000243662 CD24P25063 80 aa12.45□□□□□ -0.42
RAB38-201ENST00000243662 POLR2GP62487 172 aaKnown RBP eCLIP12.45□□□□□ -0.42
RAB38-201ENST00000243662 NHLH2Q02577 135 aa12.45□□□□□ -0.42
RAB38-201ENST00000243662 Q6ZRG5 221 aa12.45□□□□□ -0.42
RAB38-201ENST00000243662 TMEM252Q8N6L7 170 aa12.45□□□□□ -0.42
RAB38-201ENST00000243662 TMEM158Q8WZ71 300 aa12.45□□□□□ -0.42
RAB38-201ENST00000243662 BSCL2Q96G97 398 aaPredicted RBP12.45□□□□□ -0.42
RAB38-201ENST00000243662 PLA2G2EQ9NZK7 142 aa12.45□□□□□ -0.42
RAB38-201ENST00000243662 GAB2Q9UQC2 676 aa12.45□□□□□ -0.42
RAB38-201ENST00000243662 COL6A5A8TX70 2615 aa12.44□□□□□ -0.42
RAB38-201ENST00000243662 IGSF23A1L1A6 192 aa12.44□□□□□ -0.42
RAB38-201ENST00000243662 DNASE2O00115 360 aaPredicted RBP12.44□□□□□ -0.42
RAB38-201ENST00000243662 SSSCA1O60232 199 aa12.44□□□□□ -0.42
RAB38-201ENST00000243662 TSPAN15O95858 294 aa12.44□□□□□ -0.42
RAB38-201ENST00000243662 IGLV2-14P01704 120 aa12.44□□□□□ -0.42
RAB38-201ENST00000243662 OR8U9P0C7N5 309 aa12.44□□□□□ -0.42
RAB38-201ENST00000243662 EBI3Q14213 229 aa12.44□□□□□ -0.42
RAB38-201ENST00000243662 RPL39P5Q59GN2 51 aa12.44□□□□□ -0.42
RAB38-201ENST00000243662 CXorf66Q5JRM2 361 aaPredicted RBP12.44□□□□□ -0.42
RAB38-201ENST00000243662 ATRAIDQ6UW56 229 aa12.44□□□□□ -0.42
RAB38-201ENST00000243662 TCTEX1D1Q8N7M0 179 aa12.44□□□□□ -0.42
RAB38-201ENST00000243662 LFNGQ8NES3 379 aa12.44□□□□□ -0.42
RAB38-201ENST00000243662 OR8U1Q8NH10 309 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms