RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 ZNF709Q8N972 641 aa9.9□□□□□ -0.83
SEC61A1-201ENST00000243253 MGST2Q99735 147 aa9.9□□□□□ -0.83
SEC61A1-201ENST00000243253 ZFYVE26Q68DK2 2539 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 TRAV38-1A0A0B4J264 116 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 TMEM30CPA0ZSE6 113 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 K7EN84 100 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 PDE6DO43924 150 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 CHRNA7P36544 502 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 COMPP49747 757 aaPredicted RBP9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 SPCS3P61009 180 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 OR13A1Q8NGR1 328 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 FAM90A9PA6NNJ1 464 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 M0R296 226 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 STAG3L2P0CL84 134 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 STAG3L3P0CL85 134 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 WDR82Q6UXN9 313 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 NANOS1Q8WY41 292 aaKnown RBP9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 FAM122AQ96E09 287 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 FER1L6-AS2Q96M78 137 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 ZPBPQ9BS86 351 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 NAV3Q8IVL0 2385 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 SETD2Q9BYW2 2564 aaPredicted RBP9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 FAM208BQ5VWN6 2430 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 C19orf67A6NJJ6 358 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 AQP7O14520 342 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 SP9P0CG40 484 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 CDC34P49427 236 aaPredicted RBP9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 UTF1Q5T230 341 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 C1orf194Q5T5A4 169 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 LRRC29Q8WV35 223 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 LURAP1Q96LR2 239 aa9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 ZNF71Q9NQZ8 489 aaPredicted RBP9.89□□□□□ -0.83
SEC61A1-201ENST00000243253 MYOD1P15172 320 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 RAB4AP20338 218 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 DUTP33316 252 aaKnown RBP9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 TGIF2LXQ8IUE1 241 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 KLF14Q8TD94 323 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 DDB2Q92466 427 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 CHODLQ9H9P2 273 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 HEYLQ9NQ87 328 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 ZNF705FA8MVS1 300 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 IGKV3-15P01624 115 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 ZNF705DP0CH99 300 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 ZNF705BP0CI00 300 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 CD1BP29016 333 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 CCKARP32238 428 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 OPRK1P41145 380 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 REG1BP48304 166 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 HTD2P86397 168 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 LHFPL4Q7Z7J7 247 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 MRPL41Q8IXM3 137 aaKnown RBP9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 RND1Q92730 232 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 SFRP2Q96HF1 295 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 CIB3Q96Q77 187 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 OR5B12Q96R08 314 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 ZDHHC11Q9H8X9 412 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 M0R1X1 148 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 CDX4O14627 284 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 GFRA3O60609 400 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 NDUFB4O95168 129 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 WT1P19544 449 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 H2BFWTQ7Z2G1 175 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 CD177Q8N6Q3 437 aa9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 YTHDF2Q9Y5A9 579 aaKnown RBP9.88□□□□□ -0.83
SEC61A1-201ENST00000243253 TMEM265A0A087WTH1 108 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 CD59P13987 128 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 ADMP35318 185 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 TIMP3P35625 211 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 ZNF134P52741 427 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 LOXL3P58215 753 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 ZNF124Q15973 351 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 RPL39P5Q59GN2 51 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 FAM78BQ5VT40 261 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 OR52E5Q8NH55 327 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 GGTLC1Q9BX51 225 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 TCF23Q7RTU1 214 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 SNRNP40Q96DI7 357 aaKnown RBP9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 RAI1Q7Z5J4 1906 aaPredicted RBP9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 FRMD6-AS1P0C7T7 363 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 RELBQ01201 579 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 PRAMEF5Q5TYX0 476 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 MOGAT3Q86VF5 341 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 TMEM18Q96B42 140 aa9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 HSD17B10Q99714 261 aaKnown RBP9.87□□□□□ -0.83
SEC61A1-201ENST00000243253 DLX1P56177 255 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 ERVFC1-1P60608 527 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 HLA-DRB5Q30154 266 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 TDRG1Q3Y452 100 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 TPTE2P1Q5T6R2 138 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 DUX4L9Q6RFH8 374 aaPredicted RBP9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 Q6ZWC4 215 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 Q8N976 141 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 C11orf52Q96A22 123 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 GCM1Q9NP62 436 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 CLCF1Q9UBD9 225 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 TRAV3A0A0B4J244 114 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 SCGB1D1O95968 90 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 G0S2P27469 103 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 CCL8P80075 99 aa9.86□□□□□ -0.83
SEC61A1-201ENST00000243253 TMEM178AQ8NBL3 297 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms