RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 SLC2A9Q9NRM0 540 aa10.6□□□□□ -0.71
DDX39A-201ENST00000242776 C19orf73Q9NVV2 129 aa10.6□□□□□ -0.71
DDX39A-201ENST00000242776 PRELID3BQ9Y3B1 194 aa10.6□□□□□ -0.71
DDX39A-201ENST00000242776 PLECQ15149 4684 aaKnown RBP10.59□□□□□ -0.71
DDX39A-201ENST00000242776 IGHV7-81A0A0B4J1V7 117 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 IGLV2-14P01704 120 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 RLN1P04808 185 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 KIR2DS2P43631 304 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 PIGPP57054 158 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 CBX3Q13185 183 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 HAGHQ16775 308 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 PLET1Q6UQ28 207 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 NRARPQ7Z6K4 114 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 TMED4Q7Z7H5 227 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 DUSP18Q8NEJ0 188 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 ABHD5Q8WTS1 349 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 C5orf30Q96GV9 206 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 MS4A10Q96PG2 267 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 MRPL20Q9BYC9 149 aaKnown RBP10.59□□□□□ -0.71
DDX39A-201ENST00000242776 FBXO7Q9Y3I1 522 aa10.59□□□□□ -0.71
DDX39A-201ENST00000242776 ARPC1BO15143 372 aaKnown RBP10.58□□□□□ -0.72
DDX39A-201ENST00000242776 TNFSF12O43508 249 aa10.58□□□□□ -0.72
DDX39A-201ENST00000242776 LGALS1P09382 135 aaKnown RBP10.58□□□□□ -0.72
DDX39A-201ENST00000242776 RRASP10301 218 aa10.58□□□□□ -0.72
DDX39A-201ENST00000242776 PI3P19957 117 aa10.58□□□□□ -0.72
DDX39A-201ENST00000242776 DUTP33316 252 aaKnown RBP10.58□□□□□ -0.72
DDX39A-201ENST00000242776 UBE2MP61081 183 aaKnown RBP10.58□□□□□ -0.72
DDX39A-201ENST00000242776 RTL8BQ17RB0 113 aa10.58□□□□□ -0.72
DDX39A-201ENST00000242776 TCTEX1D2Q8WW35 142 aa10.58□□□□□ -0.72
DDX39A-201ENST00000242776 NABP2Q9BQ15 211 aa10.58□□□□□ -0.72
DDX39A-201ENST00000242776 C5orf66Q9H5L9 145 aa10.58□□□□□ -0.72
DDX39A-201ENST00000242776 NUDT15Q9NV35 164 aa10.58□□□□□ -0.72
DDX39A-201ENST00000242776 TEX13DA0A0J9YY54 714 aaPredicted RBP10.57□□□□□ -0.72
DDX39A-201ENST00000242776 MPPED1O15442 326 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 SOX15O60248 233 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 PGLYRP1O75594 196 aaPredicted RBP10.57□□□□□ -0.72
DDX39A-201ENST00000242776 B3GALNT1O75752 331 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 H2AFB2P0C5Z0 115 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 CT45A6P0DMU7 189 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 CT45A5P0DMU8 189 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 CT45A7P0DMV0 189 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 MC5RP33032 325 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 NDPQ00604 133 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 EIF4EBP1Q13541 118 aaPredicted RBP10.57□□□□□ -0.72
DDX39A-201ENST00000242776 TBC1D26Q86UD7 250 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 TCTEX1D1Q8N7M0 179 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 MINDY2Q8NBR6 621 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 OR51H1Q8NH63 302 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 RTBDNQ9BSG5 229 aaPredicted RBP10.57□□□□□ -0.72
DDX39A-201ENST00000242776 TUBA4BQ9H853 241 aa10.57□□□□□ -0.72
DDX39A-201ENST00000242776 TRAV6A0A075B6T7 132 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 CRYM-AS1A6NIL9 109 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 H0YJW9 148 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 PROP1O75360 226 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 ANXA3P12429 323 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 AKR1C4P17516 323 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 F2RP25116 425 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 TMEM128Q5BJH2 165 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 LIN54Q6MZP7 749 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 PDPNQ86YL7 162 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 DRAXINQ8NBI3 349 aaPredicted RBP10.56□□□□□ -0.72
DDX39A-201ENST00000242776 CD300LFQ8TDQ1 290 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 NAA60Q9H7X0 242 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 TPSG1Q9NRR2 321 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 SLC35D1Q9NTN3 355 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 ZNF580Q9UK33 172 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 KCNIP3Q9Y2W7 256 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 WASHC3Q9Y3C0 194 aa10.56□□□□□ -0.72
DDX39A-201ENST00000242776 LINC00473A8K010 186 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 H7C2Y5 167 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 NBR2O15453 112 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 HLA-DRB1P01911 266 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 HSPB1P04792 205 aaKnown RBP10.55□□□□□ -0.72
DDX39A-201ENST00000242776 C5orf64Q2M2E5 130 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 TRIM16LQ309B1 348 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 GLDNQ6ZMI3 551 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-201ENST00000242776 SLC25A42Q86VD7 318 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 ZNF383Q8NA42 475 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 ADAD2Q8NCV1 583 aaKnown RBP10.55□□□□□ -0.72
DDX39A-201ENST00000242776 OR5AN1Q8NGI8 311 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 OR4S2Q8NH73 311 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 FAM103A1Q9BTL3 118 aaKnown RBP10.55□□□□□ -0.72
DDX39A-201ENST00000242776 ELOVL1Q9BW60 279 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 FAM212BQ9NTI7 297 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-201ENST00000242776 FLVCR2Q9UPI3 526 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 FOXA2Q9Y261 457 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-201ENST00000242776 C3orf85A0A1B0GTC6 90 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 H0Y980 276 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 FCGR3BO75015 233 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 VAMP1P23763 118 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 TPPP2P59282 170 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 RPL30P62888 115 aaKnown RBP10.55□□□□□ -0.72
DDX39A-201ENST00000242776 SPAG16Q8N0X2 631 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 DDB2Q92466 427 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 TMEM230Q96A57 120 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 FLYWCH2Q96CP2 140 aaKnown RBP10.55□□□□□ -0.72
DDX39A-201ENST00000242776 CLCC1Q96S66 551 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 GPHA2Q96T91 129 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 FBXL15Q9H469 300 aa10.55□□□□□ -0.72
DDX39A-201ENST00000242776 FRAS1Q86XX4 4008 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms