RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 OR8G2PQ6IF36 304 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 CYP2G1PQ6ZSU1 146 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 ZADH2Q8N4Q0 377 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 RPP25LQ8N5L8 163 aaKnown RBP6.45□□□□□ -1.38
CXCR4-201ENST00000241393 CD177Q8N6Q3 437 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 ZNF709Q8N972 641 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 DEFB124Q8NES8 71 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 Q8WTZ3 238 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 DPF1Q92782 380 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 ACTR3CQ9C0K3 210 aaPredicted RBP6.45□□□□□ -1.38
CXCR4-201ENST00000241393 C11orf21Q9P2W6 132 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 PEMTQ9UBM1 199 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 NAT8Q9UHE5 227 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 CACNA1HO95180 2353 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 TRBV24-1A0A075B6N3 115 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 IGHV3-64DA0A0J9YX35 117 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 PCP4L1A6NKN8 68 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 CEBPZOSA8MTT3 80 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 ZNF727A8MUV8 499 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 RBMXL2O75526 392 aaKnown RBP6.45□□□□□ -1.38
CXCR4-201ENST00000241393 KBTBD11O94819 623 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 FBP1P09467 338 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 FGF7P21781 194 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 DUTP33316 252 aaKnown RBP6.45□□□□□ -1.38
CXCR4-201ENST00000241393 SSTR5P35346 364 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 GLRXP35754 106 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 PSMB3P49720 205 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 RAB7AP51149 207 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 SPCS3P61009 180 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 KIAA0141Q14154 515 aaPredicted RBP6.45□□□□□ -1.38
CXCR4-201ENST00000241393 TMEM30BQ3MIR4 351 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 Q3ZCU0 254 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 WDR25Q64LD2 544 aaPredicted RBP6.45□□□□□ -1.38
CXCR4-201ENST00000241393 SSX7Q7RTT5 188 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 C1orf87Q8N0U7 546 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 GCSAMQ8N6F7 178 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.45□□□□□ -1.38
CXCR4-201ENST00000241393 MPLKIPQ8TAP9 179 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 WIPF2Q8TF74 440 aaPredicted RBP6.45□□□□□ -1.38
CXCR4-201ENST00000241393 PRSS22Q9GZN4 317 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 UFSP2Q9NUQ7 469 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 OR6C3Q9NZP0 311 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 CLN8Q9UBY8 286 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 PSG11Q9UQ72 335 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 KIAA2026Q5HYC2 2103 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 USF3Q68DE3 2245 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 FRYLO94915 3013 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 IGLV3-9A0A075B6K5 115 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 IGKV1D-17A0A075B6S4 117 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 SMCO3A2RU48 225 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 SEC14L6B5MCN3 397 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 CYB5BO43169 146 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 ZG16O60844 167 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 IGKV1D-33P01593 117 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 IGKV1-33P01594 117 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 NQO2P16083 231 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 CDX1P47902 265 aaPredicted RBP6.44□□□□□ -1.38
CXCR4-201ENST00000241393 TMPRSS3P57727 454 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 CD81P60033 236 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 ERVK-16P61578 105 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 B2MP61769 119 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 SRSF6Q13247 344 aaKnown RBP6.44□□□□□ -1.38
CXCR4-201ENST00000241393 ACOT6Q3I5F7 207 aaPredicted RBP6.44□□□□□ -1.38
CXCR4-201ENST00000241393 MORN2Q502X0 79 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 OR2B11Q5JQS5 317 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 OR2Z1Q8NG97 314 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 OR10G9Q8NGN4 311 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 OR10G7Q8NGN6 311 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 TMEM170AQ8WVE7 144 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 RAB1CQ92928 201 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 S100PBPQ96BU1 408 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 NPCDR1Q9BY65 106 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 OPN3Q9H1Y3 402 aaPredicted RBP6.44□□□□□ -1.38
CXCR4-201ENST00000241393 GNG12Q9UBI6 72 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 WDR83OSQ9Y284 106 aa6.44□□□□□ -1.38
CXCR4-201ENST00000241393 SPAARA0A1B0GVQ0 90 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 C15orf62A8K5M9 175 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 VENTXO95231 258 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 LHBP01229 141 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 CRYAAP02489 173 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 CXCL1P09341 107 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 CGB3P0DN86 165 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 CGB7P0DN87 165 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 TIMP3P35625 211 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 FGF8P55075 233 aaPredicted RBP6.43□□□□□ -1.38
CXCR4-201ENST00000241393 KLF3P57682 345 aaPredicted RBP6.43□□□□□ -1.38
CXCR4-201ENST00000241393 TMEM241Q24JQ0 296 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 ZNF674Q2M3X9 581 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 DEFB109BQ30KR1 87 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 FFAR4Q5NUL3 377 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 NCR3LG1Q68D85 454 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 BTNL3Q6UXE8 466 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 C1orf122Q6ZSJ8 110 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 FAM222BQ8WU58 562 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 ADTRPQ96IZ2 230 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 FAM210BQ96KR6 192 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 SMIM7Q9BQ49 75 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 TXNDC17Q9BRA2 123 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 KCNIP2Q9NS61 270 aa6.43□□□□□ -1.38
CXCR4-201ENST00000241393 GTF3C1Q12789 2109 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms