RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 MAP1AP78559 2803 aaPredicted RBP12.24□□□□□ -0.45
HDHD3-201ENST00000238379 FGF16O43320 207 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 SLC25A17O43808 307 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 DFFBO76075 338 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 FGF2P09038 288 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 SEC11BP0C7V7 166 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 UBE2E1P51965 193 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 RPL8P62917 257 aaKnown RBP12.24□□□□□ -0.45
HDHD3-201ENST00000238379 PAX8Q06710 450 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 VMA21Q3ZAQ7 101 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 MINOS1Q5TGZ0 78 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 OR8G2PQ6IF36 304 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 HSD17B11Q8NBQ5 300 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 OR5B3Q8NH48 314 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 RNF141Q8WVD5 230 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 CFHR4Q92496 578 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 CXorf58Q96LI9 332 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 MINOS1-NBL1R4GNA1 71 aa12.24□□□□□ -0.45
HDHD3-201ENST00000238379 VENTXO95231 258 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 HOXA1P49639 335 aaPredicted RBP12.23□□□□□ -0.45
HDHD3-201ENST00000238379 PRCDQ00LT1 54 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 SLC38A11Q08AI6 406 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 MRGPRG-AS1Q2M3A8 158 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 CLCC1Q96S66 551 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 TSNAXQ99598 290 aaKnown RBP12.23□□□□□ -0.45
HDHD3-201ENST00000238379 SH3BGRL3Q9H299 93 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 OPN1MWP04001 364 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 CRYGBP07316 175 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 OPN1MW2P0DN77 364 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 OPN1MW3P0DN78 364 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 SLC25A16P16260 332 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 CNTFRP26992 372 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 CD1BP29016 333 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 SSX2Q16385 188 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 THNSL2Q86YJ6 484 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 DYNAPQ8N1N2 210 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 TEX45Q8NA69 505 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 OR10P1Q8NGE3 313 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 C17orf50Q8WW18 174 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 RNF5Q99942 180 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 ZNF430Q9H8G1 570 aaPredicted RBP12.23□□□□□ -0.45
HDHD3-201ENST00000238379 TPSG1Q9NRR2 321 aa12.23□□□□□ -0.45
HDHD3-201ENST00000238379 NAV2Q8IVL1 2488 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 OOSP1A8MZH6 123 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 RRHO14718 337 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 IFNA10P01566 189 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 PAX6P26367 422 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 ATP6V0CP27449 155 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 SULT1A2P50226 295 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 LGALS4P56470 323 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 RPP30P78346 268 aaKnown RBP12.22□□□□□ -0.45
HDHD3-201ENST00000238379 PSG5Q15238 335 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 LILRB2Q8N423 598 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 LRRC20Q8TCA0 184 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 TMEM170AQ8WVE7 144 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 HINT2Q9BX68 163 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 COMMD5Q9GZQ3 224 aa12.22□□□□□ -0.45
HDHD3-201ENST00000238379 BEX4Q9NWD9 120 aaPredicted RBP12.22□□□□□ -0.45
HDHD3-201ENST00000238379 TBL2Q9Y4P3 447 aaKnown RBP12.22□□□□□ -0.45
HDHD3-201ENST00000238379 A0A096LNT2 108 aa12.21□□□□□ -0.45
HDHD3-201ENST00000238379 PJVKQ0ZLH3 352 aa12.21□□□□□ -0.45
HDHD3-201ENST00000238379 ATP6V1FQ16864 119 aa12.21□□□□□ -0.45
HDHD3-201ENST00000238379 OR1L8Q8NGR8 309 aa12.21□□□□□ -0.45
HDHD3-201ENST00000238379 PINX1Q96BK5 328 aaKnown RBP12.21□□□□□ -0.45
HDHD3-201ENST00000238379 AJUBAQ96IF1 538 aa12.21□□□□□ -0.45
HDHD3-201ENST00000238379 PLEKHA3Q9HB20 300 aa12.21□□□□□ -0.45
HDHD3-201ENST00000238379 NDUFA4L2Q9NRX3 87 aa12.21□□□□□ -0.45
HDHD3-201ENST00000238379 MED9Q9NWA0 146 aa12.21□□□□□ -0.45
HDHD3-201ENST00000238379 RFNGQ9Y644 331 aa12.21□□□□□ -0.45
HDHD3-201ENST00000238379 APCP25054 2843 aa12.21□□□□□ -0.46
HDHD3-201ENST00000238379 E7EUB6 86 aa12.21□□□□□ -0.46
HDHD3-201ENST00000238379 IFNA5P01569 189 aa12.21□□□□□ -0.46
HDHD3-201ENST00000238379 DEFB113Q30KQ7 82 aa12.21□□□□□ -0.46
HDHD3-201ENST00000238379 CCDC144NLQ6NUI1 221 aa12.21□□□□□ -0.46
HDHD3-201ENST00000238379 ENY2Q9NPA8 101 aa12.21□□□□□ -0.46
HDHD3-201ENST00000238379 SIGLEC9Q9Y336 463 aa12.21□□□□□ -0.46
HDHD3-201ENST00000238379 CENPVL3A0A0U1RRI6 287 aa12.2□□□□□ -0.46
HDHD3-201ENST00000238379 CGB1A6NKQ9 187 aa12.2□□□□□ -0.46
HDHD3-201ENST00000238379 SCAF4O95104 1147 aaKnown RBP12.2□□□□□ -0.46
HDHD3-201ENST00000238379 MSMBP08118 114 aa12.2□□□□□ -0.46
HDHD3-201ENST00000238379 RUNX1Q01196 453 aa12.2□□□□□ -0.46
HDHD3-201ENST00000238379 PRSS8Q16651 343 aa12.2□□□□□ -0.46
HDHD3-201ENST00000238379 LRRC75BQ2VPJ9 315 aa12.2□□□□□ -0.46
HDHD3-201ENST00000238379 C10orf55Q5SWW7 151 aa12.2□□□□□ -0.46
HDHD3-201ENST00000238379 COMMD7Q86VX2 200 aa12.2□□□□□ -0.46
HDHD3-201ENST00000238379 SLC24A4Q8NFF2 622 aa12.2□□□□□ -0.46
HDHD3-201ENST00000238379 OR10W1Q8NGF6 305 aa12.2□□□□□ -0.46
HDHD3-201ENST00000238379 MALSU1Q96EH3 234 aa12.2□□□□□ -0.46
HDHD3-201ENST00000238379 GNPNAT1Q96EK6 184 aaPredicted RBP12.2□□□□□ -0.46
HDHD3-201ENST00000238379 PARD6GQ9BYG4 376 aaPredicted RBP12.2□□□□□ -0.46
HDHD3-201ENST00000238379 A0A1B0GW64 132 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 ZNF705EA8MWA4 302 aaPredicted RBP12.19□□□□□ -0.46
HDHD3-201ENST00000238379 PRSS46E5RG02 174 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 INS-IGF2F8WCM5 200 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 IGKV1D-33P01593 117 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 IGKV1-33P01594 117 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 OR8U8P0C7N1 319 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 NPY1RP25929 384 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 SAA4P35542 130 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 VWC2Q2TAL6 325 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms