RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CDX2Q99626 313 aaPredicted RBP12.82□□□□□ -0.36
DDX55-201ENST00000238146 FAM103A1Q9BTL3 118 aaKnown RBP12.82□□□□□ -0.36
DDX55-201ENST00000238146 SFXN3Q9BWM7 321 aa12.82□□□□□ -0.36
DDX55-201ENST00000238146 ABI3Q9P2A4 366 aa12.82□□□□□ -0.36
DDX55-201ENST00000238146 TET2Q6N021 2002 aaPredicted RBP12.82□□□□□ -0.36
DDX55-201ENST00000238146 UHRF2Q96PU4 802 aa12.82□□□□□ -0.36
DDX55-201ENST00000238146 TRBV9A0A0B4J1U6 114 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 M0R1X1 148 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 CGAP01215 116 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 LINC00614P0C842 121 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 KRTDAPP60985 99 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 MRPS11P82912 194 aaKnown RBP12.81□□□□□ -0.36
DDX55-201ENST00000238146 OR4P4Q8NGL7 312 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 TCF19Q9Y242 345 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.81□□□□□ -0.36
DDX55-201ENST00000238146 CER1O95813 267 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 IGHV1-2P23083 117 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 EDDM3AQ14507 147 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 RPL39P5Q59GN2 51 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 TEPPQ6URK8 271 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 SPRY4Q9C004 299 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 DEFB127Q9H1M4 99 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 OPN3Q9H1Y3 402 aaPredicted RBP12.81□□□□□ -0.36
DDX55-201ENST00000238146 CXXC4Q9H2H0 198 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 MED13Q9UHV7 2174 aa12.81□□□□□ -0.36
DDX55-201ENST00000238146 LYZL6O75951 148 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 MT-CO2P00403 227 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 TFPI2P48307 235 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 ERVK-16P61578 105 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 MORN2Q502X0 79 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 CD177Q8N6Q3 437 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 OR4B1Q8NGF8 309 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 TMEM140Q9NV12 185 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 ZNF586Q9NXT0 402 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 GNG12Q9UBI6 72 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 NAT8BQ9UHF3 227 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 TBL2Q9Y4P3 447 aaKnown RBP12.8□□□□□ -0.36
DDX55-201ENST00000238146 DIRC3C9JPN6 131 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 SPINK4O60575 86 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 AREGP15514 252 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 CTRLP40313 264 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 RNF2Q99496 336 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 NBEAQ8NFP9 2946 aa12.8□□□□□ -0.36
DDX55-201ENST00000238146 IGHV3-13P01766 116 aa12.79□□□□□ -0.36
DDX55-201ENST00000238146 IGHV3-7P01780 117 aa12.79□□□□□ -0.36
DDX55-201ENST00000238146 CX3CL1P78423 397 aa12.79□□□□□ -0.36
DDX55-201ENST00000238146 KIAA1644Q3SXP7 199 aa12.79□□□□□ -0.36
DDX55-201ENST00000238146 CENPWQ5EE01 88 aa12.79□□□□□ -0.36
DDX55-201ENST00000238146 FAM90A1Q86YD7 464 aa12.79□□□□□ -0.36
DDX55-201ENST00000238146 NRN1Q9NPD7 142 aa12.79□□□□□ -0.36
DDX55-201ENST00000238146 SMIM21Q3B7S5 101 aa12.79□□□□□ -0.36
DDX55-201ENST00000238146 COL5A1-AS1Q5SY13 56 aa12.79□□□□□ -0.36
DDX55-201ENST00000238146 MIR17HGQ75NE6 70 aa12.79□□□□□ -0.36
DDX55-201ENST00000238146 C1orf174Q8IYL3 243 aa12.79□□□□□ -0.36
DDX55-201ENST00000238146 RCHY1Q96PM5 261 aa12.79□□□□□ -0.36
DDX55-201ENST00000238146 SPRR3Q9UBC9 169 aa12.79□□□□□ -0.36
DDX55-201ENST00000238146 TRGV8A0A0C4DH27 118 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 HELTA6NFD8 242 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 CRYBB3P26998 211 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 GNG4P50150 75 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 ZNF134P52741 427 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 TRAT1Q6PIZ9 186 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 TMEM136Q6ZRR5 245 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 DOLPP1Q86YN1 238 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 RNASE7Q9H1E1 156 aaKnown RBP12.78□□□□□ -0.36
DDX55-201ENST00000238146 AHRRA9YTQ3 701 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 C9orf172C9J069 976 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 MT-ND6P03923 174 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 OR10J4P0C629 311 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 IGFBP2P18065 325 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 AMTP48728 403 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 PRR20EP86478 221 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 PRR20CP86479 221 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 PRR20DP86480 221 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 PRR20BP86481 221 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 PRR20AP86496 221 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 PEAR1Q5VY43 1037 aaPredicted RBP12.78□□□□□ -0.36
DDX55-201ENST00000238146 PQLC2Q6ZP29 291 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 S1PR3Q99500 378 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 ZPBPQ9BS86 351 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 PRR14LQ5THK1 2151 aa12.78□□□□□ -0.36
DDX55-201ENST00000238146 SAA2-SAA4A0A096LPE2 208 aa12.77□□□□□ -0.36
DDX55-201ENST00000238146 A0A1W2PS18 150 aa12.77□□□□□ -0.36
DDX55-201ENST00000238146 ACTL6BO94805 426 aa12.77□□□□□ -0.36
DDX55-201ENST00000238146 NPY1RP25929 384 aa12.77□□□□□ -0.36
DDX55-201ENST00000238146 SLC35B1P78383 322 aa12.77□□□□□ -0.36
DDX55-201ENST00000238146 MMDQ15546 238 aa12.77□□□□□ -0.36
DDX55-201ENST00000238146 OR10J3Q5JRS4 329 aa12.77□□□□□ -0.36
DDX55-201ENST00000238146 DMRTA1Q5VZB9 504 aa12.77□□□□□ -0.36
DDX55-201ENST00000238146 FOXJ2Q9P0K8 574 aa12.77□□□□□ -0.36
DDX55-201ENST00000238146 JPT1Q9UK76 154 aa12.77□□□□□ -0.36
DDX55-201ENST00000238146 FZR1Q9UM11 496 aa12.77□□□□□ -0.36
DDX55-201ENST00000238146 KLF13Q9Y2Y9 288 aaPredicted RBP12.77□□□□□ -0.36
DDX55-201ENST00000238146 KLRC4-KLRK1H3BQV0 150 aa12.77□□□□□ -0.37
DDX55-201ENST00000238146 LINC00869P0C866 280 aa12.77□□□□□ -0.37
DDX55-201ENST00000238146 PRDX2P32119 198 aa12.77□□□□□ -0.37
DDX55-201ENST00000238146 RAB7AP51149 207 aa12.77□□□□□ -0.37
DDX55-201ENST00000238146 RAB31Q13636 194 aa12.77□□□□□ -0.37
DDX55-201ENST00000238146 FXYD3Q14802 87 aa12.77□□□□□ -0.37
DDX55-201ENST00000238146 PSG5Q15238 335 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms