RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 VKORC1L1Q8N0U8 176 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 OR13C8Q8NGS7 320 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 MARCH1Q8TCQ1 289 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 SRSF12Q8WXF0 261 aaKnown RBP8.83□□□□□ -1
SF3B6-201ENST00000233468 S100ZQ8WXG8 99 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 TRIM63Q969Q1 353 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 FAM103A1Q9BTL3 118 aaKnown RBP8.83□□□□□ -1
SF3B6-201ENST00000233468 COMMD5Q9GZQ3 224 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 SRRQ9GZT4 340 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 ZNF430Q9H8G1 570 aaPredicted RBP8.83□□□□□ -1
SF3B6-201ENST00000233468 ZNF355PQ9NSJ1 428 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 FKBP11Q9NYL4 201 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 KCNIP3Q9Y2W7 256 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 A0A0G2JLM5 398 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 TEX13DA0A0J9YY54 714 aaPredicted RBP8.82□□□□□ -1
SF3B6-201ENST00000233468 C3orf85A0A1B0GTC6 90 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 MSGN1A6NI15 193 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 ARPC1BO15143 372 aaKnown RBP8.82□□□□□ -1
SF3B6-201ENST00000233468 DHFRP00374 187 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 KRASP01116 189 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 EGR2P11161 476 aaPredicted RBP8.82□□□□□ -1
SF3B6-201ENST00000233468 RPL27AP46776 148 aaKnown RBP8.82□□□□□ -1
SF3B6-201ENST00000233468 RAB9AP51151 201 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 DHODHQ02127 395 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 CNPY1Q3B7I2 92 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 FAAP20Q6NZ36 180 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 C10orf99Q6UWK7 81 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 SGPP2Q8IWX5 399 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 MRPL41Q8IXM3 137 aaKnown RBP8.82□□□□□ -1
SF3B6-201ENST00000233468 KLHL30-AS1Q8NEE0 82 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 FAM110DQ8TAY7 271 aaPredicted RBP8.82□□□□□ -1
SF3B6-201ENST00000233468 UBE2E2Q96LR5 201 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 SLC25A21Q9BQT8 299 aaPredicted RBP8.82□□□□□ -1
SF3B6-201ENST00000233468 C7orf50Q9BRJ6 194 aaKnown RBP8.82□□□□□ -1
SF3B6-201ENST00000233468 TMEM140Q9NV12 185 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 PTTG2Q9NZH5 202 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 GPR132Q9UNW8 380 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 VSIG4Q9Y279 399 aa8.82□□□□□ -1
SF3B6-201ENST00000233468 UPK2O00526 184 aa8.81□□□□□ -1
SF3B6-201ENST00000233468 CYB5BO43169 146 aa8.81□□□□□ -1
SF3B6-201ENST00000233468 BRI3O95415 125 aa8.81□□□□□ -1
SF3B6-201ENST00000233468 RPLP1P05386 114 aaKnown RBP8.81□□□□□ -1
SF3B6-201ENST00000233468 ANXA3P12429 323 aa8.81□□□□□ -1
SF3B6-201ENST00000233468 PI3P19957 117 aa8.81□□□□□ -1
SF3B6-201ENST00000233468 TRIM16LQ309B1 348 aa8.81□□□□□ -1
SF3B6-201ENST00000233468 ZNF585BQ52M93 769 aa8.81□□□□□ -1
SF3B6-201ENST00000233468 C19orf54Q5BKX5 351 aa8.81□□□□□ -1
SF3B6-201ENST00000233468 H2BFWTQ7Z2G1 175 aa8.81□□□□□ -1
SF3B6-201ENST00000233468 HSD17B13Q7Z5P4 300 aaPredicted RBP8.81□□□□□ -1
SF3B6-201ENST00000233468 SRSF8Q9BRL6 282 aaKnown RBP8.81□□□□□ -1
SF3B6-201ENST00000233468 PRNDQ9UKY0 176 aa8.81□□□□□ -1
SF3B6-201ENST00000233468 FBXO7Q9Y3I1 522 aa8.81□□□□□ -1
SF3B6-201ENST00000233468 C13orf42A0A1B0GVH6 325 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 OR9G9P0C7N8 305 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 G6PCP35575 357 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 MYCNOSP40205 109 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 OR5T1Q8NG75 326 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 OR1L8Q8NGR8 309 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 OR4A16Q8NH70 328 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 RNASE11Q8TAA1 199 aaKnown RBP8.8□□□□□ -1
SF3B6-201ENST00000233468 C4orf3Q8WVX3 66 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 RRNAD1Q96FB5 475 aaKnown RBP8.8□□□□□ -1
SF3B6-201ENST00000233468 USMG5Q96IX5 58 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 FYTTD1Q96QD9 318 aaKnown RBP8.8□□□□□ -1
SF3B6-201ENST00000233468 RTBDNQ9BSG5 229 aaPredicted RBP8.8□□□□□ -1
SF3B6-201ENST00000233468 CCDC32Q9BV29 185 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 C5orf66Q9H5L9 145 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 NAA60Q9H7X0 242 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 COA4Q9NYJ1 87 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 CACFD1Q9UGQ2 172 aa8.8□□□□□ -1
SF3B6-201ENST00000233468 CRYM-AS1A6NIL9 109 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 RBMXL2O75526 392 aaKnown RBP8.79□□□□□ -1
SF3B6-201ENST00000233468 PRB2P02812 416 aaPredicted RBP8.79□□□□□ -1
SF3B6-201ENST00000233468 TRGV3P03979 118 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 IL6RP08887 468 aaPredicted RBP8.79□□□□□ -1
SF3B6-201ENST00000233468 UCP1P25874 307 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 AKR1C2P52895 323 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 TPPP2P59282 170 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 SRPXP78539 464 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 SSBP2P81877 361 aaPredicted RBP8.79□□□□□ -1
SF3B6-201ENST00000233468 RBMS2Q15434 407 aaKnown RBP8.79□□□□□ -1
SF3B6-201ENST00000233468 BAK1Q16611 211 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 MRGPRG-AS1Q2M3A8 158 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 FAM209BQ5JX69 171 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 FAM219AQ8IW50 185 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 TTC9CQ8N5M4 171 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 ZNF491Q8N8L2 437 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 OR5B3Q8NH48 314 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 MYOZ3Q8TDC0 251 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 TMEM56Q96MV1 263 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 QTRT1Q9BXR0 403 aaKnown RBP8.79□□□□□ -1
SF3B6-201ENST00000233468 GPR61Q9BZJ8 451 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 WDR12Q9GZL7 423 aaKnown RBP8.79□□□□□ -1
SF3B6-201ENST00000233468 TMEM222Q9H0R3 208 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 ZNF257Q9Y2Q1 563 aa8.79□□□□□ -1
SF3B6-201ENST00000233468 FAM223BA6NKX1 122 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 NPIPB5A8MRT5 1133 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 G3V4G9 280 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 CCL24O00175 119 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 DUS4LO95620 317 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms