RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 FAM90A8PA6NJQ4 464 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 FAM90A7PA6NKC0 464 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 FAM90A22PA8MWA6 464 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 FAM90A12PA8MX19 464 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 FAM90A5PA8MXJ8 464 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 FAM90A23PA8MXZ1 464 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 FAM90A15PP0C7V4 464 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 FAM90A13PP0C7W8 464 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 FAM90A14PP0C7W9 464 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 FAM90A24PP0C7X0 464 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 PMCHL1Q16048 86 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 LRRC10Q5BKY1 277 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 PPP1R32Q7Z5V6 425 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 Q8N7P7 452 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 IMMP1LQ96LU5 166 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 DOCK10Q96BY6 2186 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 SAA2-SAA4A0A096LPE2 208 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 TRAV24A0A0B4J272 114 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 MUC21A0A0G2JKD1 596 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 MUC21A0A140T8X8 626 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 LRRC30A6NM36 301 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 K7ERU9 68 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 CELA2AP08217 269 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 ARG2P78540 354 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 TNXAQ16473 311 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 MUC21Q5SSG8 566 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 EBLN2Q6P2I7 272 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 C19orf35Q6ZS72 473 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 EAF1Q96JC9 268 aaPredicted RBP13.14□□□□□ -0.31
DDX1-201ENST00000233084 GP6Q9HCN6 339 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 FAM90A26D6RGX4 464 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 IGHV3-9P01782 118 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 CELA3BP08861 270 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 FAM53AQ6NSI3 398 aaPredicted RBP13.14□□□□□ -0.31
DDX1-201ENST00000233084 SERTAD4Q9NUC0 356 aa13.14□□□□□ -0.31
DDX1-201ENST00000233084 TRBV9A0A0B4J1U6 114 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 C21orf140B9A014 251 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 M0R2Z0 102 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 HSBP1O75506 76 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 CD1BP29016 333 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 SRD5A2P31213 254 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 MIC13Q5XKP0 118 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 OR2H1Q9GZK4 316 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 TMEM38BQ9NVV0 291 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 NBEAQ8NFP9 2946 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 CA6P23280 308 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 CA7P43166 264 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 WDR73Q6P4I2 378 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 KIR3DL3Q8N743 410 aa13.13□□□□□ -0.31
DDX1-201ENST00000233084 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.13□□□□□ -0.31
DDX1-201ENST00000233084 LOC400499M0QZD8 3231 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 CA1P00915 261 aaPredicted RBP13.12□□□□□ -0.31
DDX1-201ENST00000233084 CX3CL1P78423 397 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 SPATA12Q7Z6I5 190 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 SSMEM1Q8WWF3 244 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 SARAFQ96BY9 339 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 TRAPPC2LQ9UL33 140 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 ARL2-SNX15V9GYD0 113 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 FAM181BA6NEQ2 426 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 MT-ND6P03923 174 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 LINC00205P59089 165 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 PDLIM3Q53GG5 364 aaPredicted RBP13.12□□□□□ -0.31
DDX1-201ENST00000233084 OR52L2PQ8NGH6 319 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 ZNF430Q9H8G1 570 aaPredicted RBP13.12□□□□□ -0.31
DDX1-201ENST00000233084 CLCF1Q9UBD9 225 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 LAMA5O15230 3695 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 LRP5LA4QPB2 252 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 HSBP1L1C9JCN9 74 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 FOXH1O75593 365 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 TOX4O94842 621 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 CXorf1O96002 111 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 APCSP02743 223 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 RPL30P62888 115 aaKnown RBP13.12□□□□□ -0.31
DDX1-201ENST00000233084 SLAQ13239 276 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 CEACAM16Q2WEN9 425 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 SPATA31B1PQ5VZV4 182 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 RNASEKQ6P5S7 137 aaKnown RBP13.12□□□□□ -0.31
DDX1-201ENST00000233084 IGF2-ASQ6U949 168 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 PQLC2Q6ZP29 291 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 SRXN1Q9BYN0 137 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 CLEC5AQ9NY25 188 aa13.12□□□□□ -0.31
DDX1-201ENST00000233084 CACNA1DQ01668 2161 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 H0YJW9 148 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 ZFAND5O76080 213 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 GATA2P23769 480 aaPredicted RBP13.11□□□□□ -0.31
DDX1-201ENST00000233084 SSTR5P35346 364 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 SELENOVP59797 346 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 PSG9Q00887 426 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 CENPWQ5EE01 88 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 C9orf135Q5VTT2 229 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 SPTBN4Q9H254 2564 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.11□□□□□ -0.31
DDX1-201ENST00000233084 RAB29O14966 203 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 STAG3L2P0CL84 134 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 STAG3L3P0CL85 134 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 OR4P4Q8NGL7 312 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 C18orf32Q8TCD1 76 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 ABHD3Q8WU67 409 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 SMIM12Q96EX1 92 aa13.11□□□□□ -0.31
DDX1-201ENST00000233084 FOXB1Q99853 325 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms